RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
HDAC7-224ENST00000488927 PFASO15067 1338 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 CDKL5O76039 1030 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 XRCC5P13010 732 aaKnown RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 IFNAR1P17181 557 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 ADORA2AP29274 412 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 MCM2P49736 904 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 CCT2P78371 535 aaKnown RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 FUT2Q10981 343 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 USH1GQ495M9 461 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 FBXO46Q6PJ61 603 aaPredicted RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 TRMT44Q8IYL2 757 aaKnown RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 CMTR1Q8N1G2 835 aaKnown RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 ANKRD35Q8N283 1001 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 ZSCAN31Q96LW9 406 aaPredicted RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
HDAC7-224ENST00000488927 PCDHA1Q9Y5I3 950 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 CNTNAP5Q8WYK1 1306 aa18.47■□□□□ 0.55
HDAC7-224ENST00000488927 hCG_1984214I3L0E3 225 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 HOXC6P09630 235 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
HDAC7-224ENST00000488927 STK3Q13188 491 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 DPP9Q86TI2 863 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 MCF2L2Q86YR7 1114 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 ZNF713Q8N859 430 aaPredicted RBP18.46■□□□□ 0.55
HDAC7-224ENST00000488927 RGS22Q8NE09 1264 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 USP6NLQ92738 828 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 DDX11Q96FC9 970 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 APBA2Q99767 749 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 RNF26Q9BY78 433 aaPredicted RBP18.46■□□□□ 0.55
HDAC7-224ENST00000488927 GABRQQ9UN88 632 aa18.46■□□□□ 0.55
HDAC7-224ENST00000488927 MGAMO43451 1857 aa18.46■□□□□ 0.54
HDAC7-224ENST00000488927 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
HDAC7-224ENST00000488927 TRIM22Q8IYM9 498 aa18.45■□□□□ 0.54
HDAC7-224ENST00000488927 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
HDAC7-224ENST00000488927 PXYLP1Q8TE99 480 aa18.45■□□□□ 0.54
HDAC7-224ENST00000488927 PIBF1Q8WXW3 757 aa18.45■□□□□ 0.54
HDAC7-224ENST00000488927 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
HDAC7-224ENST00000488927 SH2B1Q9NRF2 756 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-224ENST00000488927 V9GY48 417 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-224ENST00000488927 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
HDAC7-224ENST00000488927 PPP1R11O60927 126 aaPredicted RBP18.44■□□□□ 0.54
HDAC7-224ENST00000488927 SCRN1Q12765 414 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 NTRK3Q16288 839 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 ME3Q16798 604 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 MUM1L1Q5H9M0 696 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 SLAIN1Q8ND83 568 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 CLEC4DQ8WXI8 215 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 A1CFQ9NQ94 594 aaKnown RBP18.44■□□□□ 0.54
HDAC7-224ENST00000488927 MAP3K20Q9NYL2 800 aaKnown RBP18.44■□□□□ 0.54
HDAC7-224ENST00000488927 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
HDAC7-224ENST00000488927 ZNF236Q9UL36 1845 aa18.44■□□□□ 0.54
HDAC7-224ENST00000488927 ADCY3O60266 1144 aa18.43■□□□□ 0.54
HDAC7-224ENST00000488927 CYP2B6P20813 491 aa18.43■□□□□ 0.54
HDAC7-224ENST00000488927 SSRP1Q08945 709 aaKnown RBP18.43■□□□□ 0.54
HDAC7-224ENST00000488927 NSMFQ6X4W1 530 aa18.43■□□□□ 0.54
HDAC7-224ENST00000488927 TEX2Q8IWB9 1127 aa18.43■□□□□ 0.54
HDAC7-224ENST00000488927 CYP39A1Q9NYL5 469 aa18.43■□□□□ 0.54
HDAC7-224ENST00000488927 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
HDAC7-224ENST00000488927 ZSWIM8A7E2V4 1837 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 DNAJC25-GNG10A0A024R161 153 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 NFIBO00712 420 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 PFKFB3Q16875 520 aaPredicted RBP18.42■□□□□ 0.54
HDAC7-224ENST00000488927 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 RNF207Q6ZRF8 634 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 MCOLN1Q9GZU1 580 aa18.42■□□□□ 0.54
HDAC7-224ENST00000488927 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 COBLO75128 1261 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 PGK2P07205 417 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 SCG2P13521 617 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 GRK4P32298 578 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 GHRHRQ02643 423 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 ZNF792Q3KQV3 632 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 SLC9C1Q4G0N8 1177 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 OLFML2BQ68BL8 750 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 ZNF467Q7Z7K2 595 aaPredicted RBP18.41■□□□□ 0.54
HDAC7-224ENST00000488927 MSL3Q8N5Y2 521 aaKnown RBP18.41■□□□□ 0.54
HDAC7-224ENST00000488927 CCDC12Q8WUD4 166 aaPredicted RBP18.41■□□□□ 0.54
HDAC7-224ENST00000488927 PHKBQ93100 1093 aa18.41■□□□□ 0.54
HDAC7-224ENST00000488927 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
HDAC7-224ENST00000488927 PLXNB2O15031 1838 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 hCG_1642624A0A1W2PR95 340 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 DEXIO95424 95 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 TAL1P17542 331 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 MAML3Q96JK9 1138 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
HDAC7-224ENST00000488927 GLT8D2Q9H1C3 349 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 BARHL2Q9NY43 387 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms