RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PPP2R5DQ14738 602 aa7.43□□□□□ -1.22
SMC4-219ENST00000487747 HLA-DQA1Q5Y7H0 255 aa7.43□□□□□ -1.22
SMC4-219ENST00000487747 OLFML2BQ68BL8 750 aa7.43□□□□□ -1.22
SMC4-219ENST00000487747 TMEM151BQ8IW70 566 aa7.43□□□□□ -1.22
SMC4-219ENST00000487747 ADCY4Q8NFM4 1077 aa7.43□□□□□ -1.22
SMC4-219ENST00000487747 BUB1BO60566 1050 aaPredicted RBP7.42□□□□□ -1.22
SMC4-219ENST00000487747 CD3EP07766 207 aa7.42□□□□□ -1.22
SMC4-219ENST00000487747 C9orf131Q5VYM1 1079 aa7.42□□□□□ -1.22
SMC4-219ENST00000487747 JAMLQ86YT9 394 aa7.42□□□□□ -1.22
SMC4-219ENST00000487747 SYT8Q8NBV8 401 aa7.42□□□□□ -1.22
SMC4-219ENST00000487747 PTCHD1Q96NR3 888 aa7.42□□□□□ -1.22
SMC4-219ENST00000487747 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
SMC4-219ENST00000487747 A0A1W2PQ27 194 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 A0A1W2PQ64 194 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 A0A1W2PQC6 194 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 A0A1W2PQD8 194 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 OTOL1A6NHN0 477 aaPredicted RBP7.41□□□□□ -1.22
SMC4-219ENST00000487747 DBHP09172 617 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 ITGA4P13612 1032 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 TACR1P25103 407 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 LIMS1P48059 325 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 FEZF2Q8TBJ5 459 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 RELTQ969Z4 430 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 PWWP2AQ96N64 755 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 HAUS7Q99871 368 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 IRS2Q9Y4H2 1338 aa7.41□□□□□ -1.22
SMC4-219ENST00000487747 ZBTB7CA1YPR0 619 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 SCAMP3O14828 347 aaKnown RBP7.4□□□□□ -1.22
SMC4-219ENST00000487747 VAMP4O75379 141 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 IGFBP6P24592 240 aaPredicted RBP7.4□□□□□ -1.22
SMC4-219ENST00000487747 NOP2P46087 812 aaKnown RBP7.4□□□□□ -1.22
SMC4-219ENST00000487747 SOX9P48436 509 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 MAPKAPK2P49137 400 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 ZC3H14Q6PJT7 736 aaKnown RBP7.4□□□□□ -1.22
SMC4-219ENST00000487747 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 TP53I13Q8NBR0 393 aaPredicted RBP7.4□□□□□ -1.22
SMC4-219ENST00000487747 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 KLHL25Q9H0H3 589 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 RXFP1Q9HBX9 757 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 PDLIM7Q9NR12 457 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 FBLN5Q9UBX5 448 aa7.4□□□□□ -1.22
SMC4-219ENST00000487747 SF3B6Q9Y3B4 125 aaKnown RBP7.4□□□□□ -1.22
SMC4-219ENST00000487747 A0A1W2PQH9 124 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 FBLN1P23142 703 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 GIPRP48546 466 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 TMEM62Q0P6H9 643 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 BICRALQ6AI39 1079 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 CYP2R1Q6VVX0 501 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 ZDHHC14Q8IZN3 488 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 KLHL6Q8WZ60 621 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 FGD4Q96M96 766 aa7.39□□□□□ -1.23
SMC4-219ENST00000487747 A0A087WZG4 1122 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 FOXD2O60548 495 aaPredicted RBP7.38□□□□□ -1.23
SMC4-219ENST00000487747 PPP1R11O60927 126 aaPredicted RBP7.38□□□□□ -1.23
SMC4-219ENST00000487747 EPHX1P07099 455 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
SMC4-219ENST00000487747 HDLBPQ00341 1268 aaKnown RBP7.38□□□□□ -1.23
SMC4-219ENST00000487747 POU4F1Q01851 419 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 NR1I3Q14994 352 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 TCEAL1Q15170 157 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 PAQR3Q6TCH7 311 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
SMC4-219ENST00000487747 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
SMC4-219ENST00000487747 ZC3H12DA2A288 527 aaKnown RBP7.37□□□□□ -1.23
SMC4-219ENST00000487747 STXBP3O00186 592 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 CYBBP04839 570 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 ATF2P15336 505 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 VAMP1P23763 118 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 PRR5P85299 388 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 COL9A2Q14055 689 aaPredicted RBP7.37□□□□□ -1.23
SMC4-219ENST00000487747 DPY19L1Q2PZI1 675 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 NT5DC4Q86YG4 428 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 GPRASP2Q96D09 838 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 SHDQ96IW2 340 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 BCAS3Q9H6U6 928 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 WHRNQ9P202 907 aa7.37□□□□□ -1.23
SMC4-219ENST00000487747 F8W031 263 aaPredicted RBP7.36□□□□□ -1.23
SMC4-219ENST00000487747 FFAR3O14843 346 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 AURKAO14965 403 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 SRGAP3O43295 1099 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 TBC1D8O95759 1140 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 L1CAMP32004 1257 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 HEATR6Q6AI08 1181 aaKnown RBP7.36□□□□□ -1.23
SMC4-219ENST00000487747 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 FAM169BQ8N8A8 192 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 LINC01356Q8N9X3 169 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 RASGRP4Q8TDF6 673 aa7.36□□□□□ -1.23
SMC4-219ENST00000487747 A0A1W2PQJ5 194 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 SASH1O94885 1247 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
SMC4-219ENST00000487747 MC3RP41968 323 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 NFIXQ14938 502 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 ADAT2Q7Z6V5 191 aaKnown RBP7.35□□□□□ -1.23
SMC4-219ENST00000487747 NLGN2Q8NFZ4 835 aa7.35□□□□□ -1.23
SMC4-219ENST00000487747 ADAM7Q9H2U9 754 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms