RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF536O15090 1300 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 CYTH3O43739 400 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 GNRH1P01148 92 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 FCER1AP12319 257 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
NUP50-216ENST00000486184 SCRN1Q12765 414 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 KCTD2Q14681 263 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 ME3Q16798 604 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 GTF3C6Q969F1 213 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 PORCNQ9H237 461 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
NUP50-216ENST00000486184 STRNO43815 780 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 LARGE1O95461 756 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 IFNAR1P17181 557 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 PHKBQ93100 1093 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 MMP19Q99542 508 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
NUP50-216ENST00000486184 ARHGAP39Q9C0H5 1083 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
NUP50-216ENST00000486184 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
NUP50-216ENST00000486184 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
NUP50-216ENST00000486184 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
NUP50-216ENST00000486184 hCG_1642624A0A1W2PR95 340 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 SLC15A5A6NIM6 579 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
NUP50-216ENST00000486184 SOCS4Q8WXH5 440 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 TRIM47Q96LD4 638 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 SLC5A4Q9NY91 659 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
NUP50-216ENST00000486184 PFASO15067 1338 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 PTPDC1A2A3K4 754 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
NUP50-216ENST00000486184 SCG2P13521 617 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 PTPREP23469 700 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 RGS2P41220 211 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 PRMT2P55345 433 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 NTRK3Q16288 839 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 SLC35G1Q2M3R5 365 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
NUP50-216ENST00000486184 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 ABRAQ8N0Z2 381 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
NUP50-216ENST00000486184 WASF1Q92558 559 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
NUP50-216ENST00000486184 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
NUP50-216ENST00000486184 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 DEXIO95424 95 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
NUP50-216ENST00000486184 ADORA2AP29274 412 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 CTGFP29279 349 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 NAPAP54920 295 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 FUT2Q10981 343 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 PFKFB3Q16875 520 aaPredicted RBP13.13□□□□□ -0.31
NUP50-216ENST00000486184 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 OTOP1Q7RTM1 612 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 RAET1EQ8TD07 263 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
NUP50-216ENST00000486184 CUL5Q93034 780 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 SRRDQ9UH36 339 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
NUP50-216ENST00000486184 LCTP09848 1927 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 NFIBO00712 420 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
NUP50-216ENST00000486184 CFBP00751 764 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 XBP1P17861 261 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 PRKCZQ05513 592 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 GRB14Q14449 540 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 CCDC148Q8NFR7 591 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 APBA2Q99767 749 aa13.12□□□□□ -0.31
NUP50-216ENST00000486184 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
NUP50-216ENST00000486184 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
NUP50-216ENST00000486184 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
NUP50-216ENST00000486184 CYP2B6P20813 491 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 CALML3P27482 149 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 FLT3LGP49771 235 aa13.11□□□□□ -0.31
NUP50-216ENST00000486184 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
NUP50-216ENST00000486184 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms