RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 AKR1A1P14550 325 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 ICAM3P32942 547 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 GTF2F1P35269 517 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD6-209ENST00000482596 CAP2P40123 477 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 DEFB103AP81534 67 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 ZNF594Q96JF6 807 aaPredicted RBP8.25□□□□□ -1.09
CHD6-209ENST00000482596 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 WDR18Q9BV38 432 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 NSUN3Q9H649 340 aaKnown RBP8.25□□□□□ -1.09
CHD6-209ENST00000482596 AS3MTQ9HBK9 375 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
CHD6-209ENST00000482596 MYH13Q9UKX3 1938 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 MYO10Q9HD67 2058 aa8.25□□□□□ -1.09
CHD6-209ENST00000482596 TANC1Q9C0D5 1861 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 ZNF462Q96JM2 2506 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 A0A1B0GUL7 405 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 ANKRD18BA2A2Z9 1011 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 ADCY6O43306 1168 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 FRAT2O75474 233 aaPredicted RBP8.24□□□□□ -1.09
CHD6-209ENST00000482596 PFKMP08237 780 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 C6orf222P0C671 652 aaPredicted RBP8.24□□□□□ -1.09
CHD6-209ENST00000482596 SDHBP21912 280 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 HYAL1Q12794 435 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 PICALMQ13492 652 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 CWF19L2Q2TBE0 894 aaKnown RBP8.24□□□□□ -1.09
CHD6-209ENST00000482596 SOWAHCQ53LP3 525 aaPredicted RBP8.24□□□□□ -1.09
CHD6-209ENST00000482596 FBXO33Q7Z6M2 555 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 SLC43A3Q8NBI5 491 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 RTKNQ9BST9 563 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 IDI2Q9BXS1 227 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 MOV10L1Q9BXT6 1211 aaKnown RBP8.24□□□□□ -1.09
CHD6-209ENST00000482596 SEMA4AQ9H3S1 761 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 SMOC2Q9H3U7 446 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 TMEM134Q9H6X4 195 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 CD207Q9UJ71 328 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 GRIN2DO15399 1336 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 KIF16BQ96L93 1317 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 DMXL2Q8TDJ6 3036 aa8.24□□□□□ -1.09
CHD6-209ENST00000482596 LAMA5O15230 3695 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 ANKRD17O75179 2603 aaKnown RBP8.23□□□□□ -1.09
CHD6-209ENST00000482596 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 C1QTNF9BB2RNN3 333 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 PI15O43692 258 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 C1QTNF9P0C862 333 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 CST5P28325 142 aaPredicted RBP8.23□□□□□ -1.09
CHD6-209ENST00000482596 KCNC4Q03721 635 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 PTPROQ16827 1216 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 NRBP1Q9UHY1 535 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 CTNNA3Q9UI47 895 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
CHD6-209ENST00000482596 CNOT1A5YKK6 2376 aaKnown RBP8.22□□□□□ -1.09
CHD6-209ENST00000482596 AKAP13Q12802 2813 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 SIPA1L1O43166 1804 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 C19orf81C9J6K1 198 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 H7C1W4 665 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 STRNO43815 780 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 CYP2C9P11712 490 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 ERCC3P19447 782 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 PMLP29590 882 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 WDR5P61964 334 aaKnown RBP8.22□□□□□ -1.09
CHD6-209ENST00000482596 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
CHD6-209ENST00000482596 UBE4AQ14139 1066 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 ZYXQ15942 572 aaKnown RBP8.22□□□□□ -1.09
CHD6-209ENST00000482596 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
CHD6-209ENST00000482596 FAM117BQ6P1L5 589 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.22□□□□□ -1.094e-7■□□□□ 11.1
CHD6-209ENST00000482596 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
CHD6-209ENST00000482596 SUMF1Q8NBK3 374 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 MSLNLQ96KJ4 702 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 TINF2Q9BSI4 451 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 PLA2G12BQ9BX93 195 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 FTOQ9C0B1 505 aaKnown RBP eCLIP8.22□□□□□ -1.091e-7■■■□□ 15.9
CHD6-209ENST00000482596 INCENPQ9NQS7 918 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 NUDCQ9Y266 331 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 SUGT1Q9Y2Z0 365 aa8.22□□□□□ -1.09
CHD6-209ENST00000482596 CTAGE5O15320 804 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 KRT38O76015 456 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 EYA4O95677 639 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 BRD1O95696 1058 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 PGK2P07205 417 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 PRDX5P30044 214 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 KCNJ6P48051 423 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 CASP7P55210 303 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 RRP1P56182 461 aaKnown RBP8.21□□□□□ -1.1
CHD6-209ENST00000482596 BEX3Q00994 111 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 GNASQ5JWF2 1037 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 CXCL17Q6UXB2 119 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 ZBTB33Q86T24 672 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 VPS37DQ86XT2 251 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 CCDC105Q8IYK2 499 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 PCSK9Q8NBP7 692 aaKnown RBP8.21□□□□□ -1.1
CHD6-209ENST00000482596 SHCBP1Q8NEM2 672 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 RAD9AQ99638 391 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 IGFLR1Q9H665 355 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 MAP3K2Q9Y2U5 619 aa8.21□□□□□ -1.1
CHD6-209ENST00000482596 SRRM3A6NNA2 597 aaPredicted RBP8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms