RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 PDE4DQ08499 809 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 WTAPQ15007 396 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
SORT1-204ENST00000482236 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
SORT1-204ENST00000482236 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 ZNF536O15090 1300 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 ZEB2O60315 1214 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
SORT1-204ENST00000482236 TNFAIP2Q03169 654 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
SORT1-204ENST00000482236 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 SLC39A5Q6ZMH5 540 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 FBXO16Q8IX29 292 aaPredicted RBP13.09□□□□□ -0.31
SORT1-204ENST00000482236 GLT1D1Q96MS3 346 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 RBM8AQ9Y5S9 174 aaKnown RBP13.09□□□□□ -0.31
SORT1-204ENST00000482236 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
SORT1-204ENST00000482236 CEP290O15078 2479 aa13.08□□□□□ -0.31
SORT1-204ENST00000482236 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.32
SORT1-204ENST00000482236 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.32
SORT1-204ENST00000482236 A0A1W2PQY0 241 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 NFIBO00712 420 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 SGSM2O43147 1006 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.32
SORT1-204ENST00000482236 NOVP48745 357 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 PTH1RQ03431 593 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
SORT1-204ENST00000482236 GNASQ5JWF2 1037 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 SLC30A10Q6XR72 485 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 TLK2Q86UE8 772 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 FAM133AQ8N9E0 248 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 IL25Q9H293 177 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 ABCB11O95342 1321 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 WDR19Q8NEZ3 1342 aa13.08□□□□□ -0.32
SORT1-204ENST00000482236 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 MOXD2PA6NHM9 499 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 CYP21A2P08686 494 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 ALDH5A1P51649 535 aaPredicted RBP13.07□□□□□ -0.32
SORT1-204ENST00000482236 ACLYP53396 1101 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 KCNA10Q16322 511 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
SORT1-204ENST00000482236 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
SORT1-204ENST00000482236 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
SORT1-204ENST00000482236 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
SORT1-204ENST00000482236 CCDC69A6NI79 296 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 KLRF2D3W0D1 207 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 E7EWF7 191 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
SORT1-204ENST00000482236 DYNC1LI2O43237 492 aaPredicted RBP13.06□□□□□ -0.32
SORT1-204ENST00000482236 CLTBP09497 229 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 RAG1P15918 1043 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
SORT1-204ENST00000482236 FGD1P98174 961 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 TRAF1Q13077 416 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 PPP2R5BQ15173 497 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 CYB5R4Q7L1T6 521 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 TDHQ8IZJ6 230 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
SORT1-204ENST00000482236 PIBF1Q8WXW3 757 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
SORT1-204ENST00000482236 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
SORT1-204ENST00000482236 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
SORT1-204ENST00000482236 CFBP00751 764 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 IGHA2P01877 340 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 ASGR1P07306 291 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 KIF5BP33176 963 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 CHMP4BP1P59074 171 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 RPS6P62753 249 aaKnown RBP13.05□□□□□ -0.32
SORT1-204ENST00000482236 BEX3Q00994 111 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 TLE2Q04725 743 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
SORT1-204ENST00000482236 QRICH1Q2TAL8 776 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 PURBQ96QR8 312 aaKnown RBP13.05□□□□□ -0.32
SORT1-204ENST00000482236 ESYT1Q9BSJ8 1104 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 TMEM39AQ9NV64 488 aa13.05□□□□□ -0.32
SORT1-204ENST00000482236 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
SORT1-204ENST00000482236 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms