RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RPN1P04843 607 aaKnown RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 TUBBP07437 444 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 CDC25BP30305 580 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 GPATCH4Q5T3I0 446 aaKnown RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 GPBP1Q86WP2 473 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 MYCT1Q8N699 235 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 NAA15Q9BXJ9 866 aaKnown RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 PDE11AQ9HCR9 933 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 TMOD4Q9NZQ9 345 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 CETN3O15182 167 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 OPA1O60313 960 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 GAS7O60861 476 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 GCNT3O95395 438 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 CTDNEP1O95476 244 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 GH2P01242 217 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 TUBB4BP68371 445 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 SGMS1Q86VZ5 419 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 CTNNBL1Q8WYA6 563 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 ST7Q9NRC1 585 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 AK9Q5TCS8 1911 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 NDUFAB1O14561 156 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 FLOT1O75955 427 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 MORC3Q14149 939 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 AMNQ9BXJ7 453 aa12.55□□□□□ -0.4
SMPD4-218ENST00000482171 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
SMPD4-218ENST00000482171 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 CCDC91Q7Z6B0 441 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 SAMSN1Q9NSI8 373 aaKnown RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 KRT83P78385 493 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 MAN1B1Q9UKM7 699 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 SPATA31A6Q5VVP1 1343 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 KCNJ18B7U540 433 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 ECE2O60344 883 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 LONP1P36776 959 aaKnown RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 MAP2K1Q02750 393 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 KCNJ12Q14500 433 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 GBP6Q6ZN66 633 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 ZNF277Q9NRM2 450 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 KIAA1024Q9UPX6 916 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 TACC1O75410 805 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 HOXA13P31271 388 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 SEPT2Q15019 361 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 LRRC41Q15345 812 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-218ENST00000482171 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 IFT81Q8WYA0 676 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 PSMB7Q99436 277 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 PRDM4Q9UKN5 801 aa12.54□□□□□ -0.4
SMPD4-218ENST00000482171 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 FOXN1O15353 648 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 ZBED4O75132 1171 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 SLFN14P0C7P3 912 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
SMPD4-218ENST00000482171 TNFAIP1Q13829 316 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMPD4-218ENST00000482171 BCL9O00512 1426 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 NEFHP12036 1026 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 INPP5BP32019 993 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 PABPC4Q13310 644 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■□□□□ 9
SMPD4-218ENST00000482171 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
SMPD4-218ENST00000482171 RRP15Q9Y3B9 282 aaKnown RBP12.53□□□□□ -0.4
SMPD4-218ENST00000482171 BMP3P12645 472 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 AKR1B1P15121 316 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 PTPREP23469 700 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 TRAPPC10P48553 1259 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 BRD3Q15059 726 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 C12orf60Q5U649 245 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 FBXO33Q7Z6M2 555 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
SMPD4-218ENST00000482171 HINFPQ9BQA5 517 aa12.53□□□□□ -0.4
SMPD4-218ENST00000482171 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.4
SMPD4-218ENST00000482171 MEIS1O00470 390 aa12.52□□□□□ -0.4
SMPD4-218ENST00000482171 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.4
SMPD4-218ENST00000482171 LONRF2Q1L5Z9 754 aa12.52□□□□□ -0.4
SMPD4-218ENST00000482171 EAPPQ56P03 285 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms