RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 AMNQ9BXJ7 453 aa22.89■■□□□ 1.25
LIME1-205ENST00000480139 MCOLN1Q9GZU1 580 aa22.89■■□□□ 1.25
LIME1-205ENST00000480139 MAF1Q9H063 256 aa22.89■■□□□ 1.25
LIME1-205ENST00000480139 PTCH2Q9Y6C5 1203 aa22.89■■□□□ 1.25
LIME1-205ENST00000480139 CNTNAP5Q8WYK1 1306 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 ADORA2AP29274 412 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 SLC4A3P48751 1232 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 RAET1EQ8TD07 263 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 PXYLP1Q8TE99 480 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 APBA2Q99767 749 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 HOMER2Q9NSB8 354 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 PLXNA1Q9UIW2 1896 aa22.88■■□□□ 1.25
LIME1-205ENST00000480139 HOMER1Q86YM7 354 aa22.87■■□□□ 1.25
LIME1-205ENST00000480139 SLC5A4Q9NY91 659 aa22.87■■□□□ 1.25
LIME1-205ENST00000480139 SEC63Q9UGP8 760 aaKnown RBP22.87■■□□□ 1.25
LIME1-205ENST00000480139 TPCN1Q9ULQ1 816 aa22.87■■□□□ 1.25
LIME1-205ENST00000480139 PFASO15067 1338 aa22.86■■□□□ 1.25
LIME1-205ENST00000480139 PPP1R11O60927 126 aaPredicted RBP22.86■■□□□ 1.25
LIME1-205ENST00000480139 ADD1P35611 737 aaKnown RBP22.86■■□□□ 1.25
LIME1-205ENST00000480139 USH1GQ495M9 461 aa22.86■■□□□ 1.25
LIME1-205ENST00000480139 MUM1L1Q5H9M0 696 aa22.86■■□□□ 1.25
LIME1-205ENST00000480139 TRMT44Q8IYL2 757 aaKnown RBP22.86■■□□□ 1.25
LIME1-205ENST00000480139 CMTR1Q8N1G2 835 aaKnown RBP22.86■■□□□ 1.25
LIME1-205ENST00000480139 SLAIN1Q8ND83 568 aa22.86■■□□□ 1.25
LIME1-205ENST00000480139 RGS22Q8NE09 1264 aa22.86■■□□□ 1.25
LIME1-205ENST00000480139 CLEC4DQ8WXI8 215 aa22.86■■□□□ 1.25
LIME1-205ENST00000480139 DNAJC25-GNG10A0A024R161 153 aa22.85■■□□□ 1.25
LIME1-205ENST00000480139 PFKFB2O60825 505 aa22.85■■□□□ 1.25
LIME1-205ENST00000480139 NTRK3Q16288 839 aa22.85■■□□□ 1.25
LIME1-205ENST00000480139 ANKRD35Q8N283 1001 aa22.85■■□□□ 1.25
LIME1-205ENST00000480139 LARP6Q9BRS8 491 aaKnown RBP22.85■■□□□ 1.25
LIME1-205ENST00000480139 A1CFQ9NQ94 594 aaKnown RBP22.85■■□□□ 1.25
LIME1-205ENST00000480139 DIS3Q9Y2L1 958 aaKnown RBP22.85■■□□□ 1.25
LIME1-205ENST00000480139 MRPL11Q9Y3B7 192 aaKnown RBP22.85■■□□□ 1.25
LIME1-205ENST00000480139 ADCY3O60266 1144 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 COBLO75128 1261 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 IFNAR1P17181 557 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 TAL1P17542 331 aaPredicted RBP22.84■■□□□ 1.25
LIME1-205ENST00000480139 CYP2B6P20813 491 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 DPP9Q86TI2 863 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 CCDC82Q8N4S0 544 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 DDX11Q96FC9 970 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 RBM27Q9P2N5 1060 aaKnown RBP22.84■■□□□ 1.25
LIME1-205ENST00000480139 PCDHA1Q9Y5I3 950 aa22.84■■□□□ 1.25
LIME1-205ENST00000480139 HTTP42858 3142 aa22.83■■□□□ 1.25
LIME1-205ENST00000480139 LCTP09848 1927 aa22.83■■□□□ 1.25
LIME1-205ENST00000480139 NFIBO00712 420 aa22.83■■□□□ 1.25
LIME1-205ENST00000480139 GRK4P32298 578 aa22.83■■□□□ 1.25
LIME1-205ENST00000480139 CCT2P78371 535 aaKnown RBP22.83■■□□□ 1.25
LIME1-205ENST00000480139 SLKQ9H2G2 1235 aaPredicted RBP22.83■■□□□ 1.25
LIME1-205ENST00000480139 NCOA5Q9HCD5 579 aaKnown RBP22.83■■□□□ 1.25
LIME1-205ENST00000480139 CYP39A1Q9NYL5 469 aa22.83■■□□□ 1.25
LIME1-205ENST00000480139 hCG_1984214I3L0E3 225 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 ST18O60284 1047 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 IGHA2P01877 340 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 GHRHRQ02643 423 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 ZNF792Q3KQV3 632 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 SLC9C1Q4G0N8 1177 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 OLFML2BQ68BL8 750 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 MCF2L2Q86YR7 1114 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 SAMD3Q8N6K7 520 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 ZNF713Q8N859 430 aaPredicted RBP22.82■■□□□ 1.24
LIME1-205ENST00000480139 NPLOC4Q8TAT6 608 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 RNF26Q9BY78 433 aaPredicted RBP22.82■■□□□ 1.24
LIME1-205ENST00000480139 LIMCH1Q9UPQ0 1083 aa22.82■■□□□ 1.24
LIME1-205ENST00000480139 PRPF3O43395 683 aaKnown RBP22.81■■□□□ 1.24
LIME1-205ENST00000480139 PGK2P07205 417 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 SCRN1Q12765 414 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 STK3Q13188 491 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 ME3Q16798 604 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 CPLX2Q6PUV4 134 aaKnown RBP22.81■■□□□ 1.24
LIME1-205ENST00000480139 ZNF467Q7Z7K2 595 aaPredicted RBP22.81■■□□□ 1.24
LIME1-205ENST00000480139 FAM133AQ8N9E0 248 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 PIBF1Q8WXW3 757 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 TRIB2Q92519 343 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 ARMC5Q96C12 935 aa22.81■■□□□ 1.24
LIME1-205ENST00000480139 MAP3K20Q9NYL2 800 aaKnown RBP22.81■■□□□ 1.24
LIME1-205ENST00000480139 V9GY48 417 aaPredicted RBP22.81■■□□□ 1.24
LIME1-205ENST00000480139 CPLX1O14810 134 aa22.8■■□□□ 1.24
LIME1-205ENST00000480139 OPLAHO14841 1288 aa22.8■■□□□ 1.24
LIME1-205ENST00000480139 HMGCRP04035 888 aa22.8■■□□□ 1.24
LIME1-205ENST00000480139 NSMFQ6X4W1 530 aa22.8■■□□□ 1.24
LIME1-205ENST00000480139 RNF207Q6ZRF8 634 aa22.8■■□□□ 1.24
LIME1-205ENST00000480139 MSL3Q8N5Y2 521 aaKnown RBP22.8■■□□□ 1.24
LIME1-205ENST00000480139 MAML3Q96JK9 1138 aa22.8■■□□□ 1.24
LIME1-205ENST00000480139 POTEB2H3BUK9 544 aa22.79■■□□□ 1.24
LIME1-205ENST00000480139 CDKL5O76039 1030 aa22.79■■□□□ 1.24
LIME1-205ENST00000480139 ELNP15502 786 aa22.79■■□□□ 1.24
LIME1-205ENST00000480139 BAATQ14032 418 aaPredicted RBP22.79■■□□□ 1.24
LIME1-205ENST00000480139 CCL14Q16627 93 aa22.79■■□□□ 1.24
LIME1-205ENST00000480139 PFKFB3Q16875 520 aaPredicted RBP22.79■■□□□ 1.24
LIME1-205ENST00000480139 GTF3C6Q969F1 213 aa22.79■■□□□ 1.24
LIME1-205ENST00000480139 ZSCAN31Q96LW9 406 aaPredicted RBP22.79■■□□□ 1.24
LIME1-205ENST00000480139 LOC102724159A0A0B4J2E5 919 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 hCG_1642624A0A1W2PR95 340 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 PTPDC1A2A3K4 754 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 LARGE1O95461 756 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 HSD17B4P51659 736 aa22.78■■□□□ 1.24
LIME1-205ENST00000480139 RPS6P62753 249 aaKnown RBP22.78■■□□□ 1.24
LIME1-205ENST00000480139 PWP2Q15269 919 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms