RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 EFR3BQ9Y2G0 817 aa4.13□□□□□ -1.75
CACUL1-202ENST00000477583 A0A1W2PQ27 194 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 A0A1W2PQ64 194 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 A0A1W2PQC6 194 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 A0A1W2PQD8 194 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 VAV1P15498 845 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 IGFBP6P24592 240 aaPredicted RBP4.12□□□□□ -1.75
CACUL1-202ENST00000477583 LIMS1P48059 325 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 SOX9P48436 509 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 MAPKAPK2P49137 400 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 CEBPAP49715 358 aaPredicted RBP4.12□□□□□ -1.75
CACUL1-202ENST00000477583 ZNF165P49910 485 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 ZNF200P98182 395 aaPredicted RBP4.12□□□□□ -1.75
CACUL1-202ENST00000477583 CAP1Q01518 475 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 PLP2Q04941 152 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 CBX2Q14781 532 aaPredicted RBP4.12□□□□□ -1.75
CACUL1-202ENST00000477583 NR1I3Q14994 352 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 SPATS1Q496A3 300 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 TMEM192Q8IY95 271 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 REXO1Q8N1G1 1221 aaKnown RBP4.12□□□□□ -1.75
CACUL1-202ENST00000477583 NLGN1Q8N2Q7 840 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 NAT16Q8N8M0 369 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 SLC43A3Q8NBI5 491 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 SPATA32Q96LK8 384 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 SLC6A18Q96N87 628 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 PRR13Q9NZ81 148 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 PPT2Q9UMR5 302 aa4.12□□□□□ -1.75
CACUL1-202ENST00000477583 TNFRSF10CO14798 259 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 FFAR3O14843 346 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 GSNP06396 782 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 NME1P15531 152 aaKnown RBP4.11□□□□□ -1.75
CACUL1-202ENST00000477583 ATF4P18848 351 aaPredicted RBP4.11□□□□□ -1.75
CACUL1-202ENST00000477583 NASPP49321 788 aaPredicted RBP4.11□□□□□ -1.75
CACUL1-202ENST00000477583 SLURP1P55000 103 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 ARID5AQ03989 594 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 EFEMP1Q12805 493 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 AUHQ13825 339 aaKnown RBP4.11□□□□□ -1.75
CACUL1-202ENST00000477583 COL9A2Q14055 689 aaPredicted RBP4.11□□□□□ -1.75
CACUL1-202ENST00000477583 RTP5Q14D33 572 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 VPS37DQ86XT2 251 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 SEC16BQ96JE7 1060 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 IRS2Q9Y4H2 1338 aa4.11□□□□□ -1.75
CACUL1-202ENST00000477583 A0A1W2PQJ5 194 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 MEIS3P2A8K0S8 358 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 GSTM1P09488 218 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 MSL3P1P0C860 447 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 DNAJA1P31689 397 aaKnown RBP4.1□□□□□ -1.75
CACUL1-202ENST00000477583 MVKQ03426 396 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 TARBP2Q15633 366 aaKnown RBP4.1□□□□□ -1.75
CACUL1-202ENST00000477583 ZXDCQ2QGD7 858 aaPredicted RBP4.1□□□□□ -1.75
CACUL1-202ENST00000477583 LRRFIP1Q32MZ4 808 aaKnown RBP4.1□□□□□ -1.75
CACUL1-202ENST00000477583 RTP2Q5QGT7 225 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 FBXW10Q5XX13 1052 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 HLA-DQA1Q5Y7H0 255 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 CWF19L1Q69YN2 538 aaKnown RBP4.1□□□□□ -1.75
CACUL1-202ENST00000477583 CCDC81Q6ZN84 652 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 LSRQ86X29 649 aaPredicted RBP4.1□□□□□ -1.75
CACUL1-202ENST00000477583 JAMLQ86YT9 394 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 C7orf61Q8IZ16 206 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 TMEM52Q8NDY8 209 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 FERD3LQ96RJ6 166 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 GMLQ99445 158 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 ANTXR1Q9H6X2 564 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 USP40Q9NVE5 1235 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 ZNRF3Q9ULT6 936 aa4.1□□□□□ -1.75
CACUL1-202ENST00000477583 SRGAP3O43295 1099 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 PRICKLE3O43900 615 aaPredicted RBP4.09□□□□□ -1.75
CACUL1-202ENST00000477583 CYBBP04839 570 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 DBHP09172 617 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 FGRP09769 529 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 VWA3BQ502W6 1294 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 BICRALQ6AI39 1079 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 PAQR3Q6TCH7 311 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 CYP2R1Q6VVX0 501 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 MCF2L2Q86YR7 1114 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 CCDC144CPQ8IYA2 1237 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 SLC9A7Q96T83 725 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.09□□□□□ -1.75
CACUL1-202ENST00000477583 SLC12A9Q9BXP2 914 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 SRRTQ9BXP5 876 aaKnown RBP4.09□□□□□ -1.75
CACUL1-202ENST00000477583 TMPRSS5Q9H3S3 457 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 SUCOQ9UBS9 1254 aaKnown RBP4.09□□□□□ -1.75
CACUL1-202ENST00000477583 SUSD2Q9UGT4 822 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 FAN1Q9Y2M0 1017 aa4.09□□□□□ -1.75
CACUL1-202ENST00000477583 FAM86C2PA6NEL3 165 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 C9IYK1 514 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 K7ESM1 405 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 SHOXO15266 292 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 IMPDH2P12268 514 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 FBLN1P23142 703 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 EIF6P56537 245 aaKnown RBP4.08□□□□□ -1.76
CACUL1-202ENST00000477583 UBXN11Q5T124 520 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 FNIP1Q8TF40 1166 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 CPLX3Q8WVH0 158 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 SHDQ96IW2 340 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 DHRS1Q96LJ7 313 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 HCFC2Q9Y5Z7 792 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 MRVI1Q9Y6F6 885 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 PMF1-BGLAPU3KQ54 211 aa4.08□□□□□ -1.76
CACUL1-202ENST00000477583 A0A1B0GTL3 188 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms