RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 FAM133AQ8N9E0 248 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 ARRDC4Q8NCT1 418 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 FERMT2Q96AC1 680 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 CYP39A1Q9NYL5 469 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 NR2E3Q9Y5X4 410 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 PLXNA1Q9UIW2 1896 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 ASTN1O14525 1302 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 SYNGAP1Q96PV0 1343 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ERICH2A1L162 156 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 PTPDC1A2A3K4 754 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 DNM1LO00429 736 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 RARBP10826 455 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 SYN1P17600 705 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 CALML3P27482 149 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ADCYAP1R1P41586 468 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ANTXR2P58335 489 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 MKRN4PQ13434 485 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ACVR2BQ13705 512 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 COL9A3Q14050 684 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 WTAPQ15007 396 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 LRRC41Q15345 812 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 LRRC26Q2I0M4 334 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ASPRV1Q53RT3 343 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 TMEM67Q5HYA8 995 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 SLC30A10Q6XR72 485 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 MB21D2Q8IYB1 491 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 MSL3Q8N5Y2 521 aaKnown RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 XPNPEP3Q9NQH7 507 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 NRBP1Q9UHY1 535 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 FAM184BQ9ULE4 1060 aa9.66□□□□□ -0.86
HDAC6-221ENST00000477561 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 COLQQ9Y215 455 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-221ENST00000477561 KBTBD13C9JR72 458 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 KLRF2D3W0D1 207 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 ADCY6O43306 1168 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
HDAC6-221ENST00000477561 CDC45O75419 566 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 AKR1A1P14550 325 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
HDAC6-221ENST00000477561 NECTIN1Q15223 517 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 QRICH1Q2TAL8 776 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 CCDC144BQ3MJ40 725 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 CASC1Q6TDU7 716 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 EEPD1Q7L9B9 569 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 IGDCC4Q8TDY8 1250 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 TBC1D5Q92609 795 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 BACH2Q9BYV9 841 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 ABHD16BQ9H3Z7 469 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 MAD2L2Q9UI95 211 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 FRMPD3Q5JV73 1810 aa9.65□□□□□ -0.86
HDAC6-221ENST00000477561 SMCHD1A6NHR9 2005 aa9.65□□□□□ -0.87
HDAC6-221ENST00000477561 WDR19Q8NEZ3 1342 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-221ENST00000477561 PALM3A6NDB9 673 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-221ENST00000477561 ASB14A6NK59 587 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 PRC1O43663 620 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 PTGS1P23219 599 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 RPS6P62753 249 aaKnown RBP9.64□□□□□ -0.87
HDAC6-221ENST00000477561 TMEM63BQ5T3F8 832 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 RNF207Q6ZRF8 634 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
HDAC6-221ENST00000477561 RNF180Q86T96 592 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 HOMER1Q86YM7 354 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 RAB11FIP4Q86YS3 637 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 FBXO16Q8IX29 292 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-221ENST00000477561 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 PIBF1Q8WXW3 757 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 MYL10Q9BUA6 226 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 LRRC2Q9BYS8 371 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 KATNBL1Q9H079 304 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 PDGFCQ9NRA1 345 aa9.64□□□□□ -0.87
HDAC6-221ENST00000477561 SYNRGQ9UMZ2 1314 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 MYADML2A6NDP7 307 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 ADAMTS4O75173 837 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 MCM5P33992 734 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 ALDH5A1P51649 535 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-221ENST00000477561 TROAPQ12815 778 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 GRM4Q14833 912 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 SLC35G1Q2M3R5 365 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 C8orf34Q49A92 452 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 HABP4Q5JVS0 413 aaKnown RBP9.63□□□□□ -0.87
HDAC6-221ENST00000477561 SLC39A5Q6ZMH5 540 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 NFXL1Q6ZNB6 911 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 CATIPQ7Z7H3 387 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 PIGSQ96S52 555 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 LY9Q9HBG7 655 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms