RNA–Protein interactions for RNA: ENST00000475309.5

WIPI2-208, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best)

Gene WIPI2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-208ENST00000475309 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
WIPI2-208ENST00000475309 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
WIPI2-208ENST00000475309 STAMBPL1Q96FJ0 436 aa11.31□□□□□ -0.6
WIPI2-208ENST00000475309 CCDC8Q9H0W5 538 aaPredicted RBP11.31□□□□□ -0.6
WIPI2-208ENST00000475309 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
WIPI2-208ENST00000475309 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
WIPI2-208ENST00000475309 PPFIA2O75334 1257 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 EN1Q05925 392 aaPredicted RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 SPAG1Q07617 926 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 TAF7Q15545 349 aaPredicted RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 TEX9Q8N6V9 391 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 SPATA20Q8TB22 786 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 TBC1D31Q96DN5 1066 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 SEC16BQ96JE7 1060 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 MED15Q96RN5 788 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 MAP3K14Q99558 947 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 RGL1Q9NZL6 768 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 REXO2Q9Y3B8 237 aaKnown RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 PCDHGC5Q9Y5F6 944 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 MYH10P35580 1976 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 KDM3BQ7LBC6 1761 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 GOLGA6L10A6NI86 522 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 ABLIM1O14639 778 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 TRAPPC3O43617 180 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 KRT14P02533 472 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 MRRFQ96E11 262 aaKnown RBP11.3□□□□□ -0.6
WIPI2-208ENST00000475309 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
WIPI2-208ENST00000475309 A6NHS1 94 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 ZNF233A6NK53 670 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 E7EWF7 191 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 OPLAHO14841 1288 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 HOXB7P09629 217 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 IDEP14735 1019 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 KRT9P35527 623 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 MAGEA8P43361 318 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 PAK2Q13177 524 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 LAMB3Q13751 1172 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 THEMIS2Q5TEJ8 643 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 GKAP1Q5VSY0 366 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 IFT20Q8IY31 132 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 CCT6BQ92526 530 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 YIPF3Q9GZM5 350 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 ALS2Q96Q42 1657 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 CAMTA1Q9Y6Y1 1673 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 CPLX1O14810 134 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 PAEPP09466 180 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 CD151P48509 253 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 SNX1Q13596 522 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 HIBCHQ6NVY1 386 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 SDCCAG8Q86SQ7 713 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 TRIM74Q86UV6 250 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 TRIM73Q86UV7 250 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 PAPOLBQ9NRJ5 636 aaKnown RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 LIMA1Q9UHB6 759 aaKnown RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 DMGDHQ9UI17 866 aaKnown RBP11.29□□□□□ -0.6
WIPI2-208ENST00000475309 LEMD3Q9Y2U8 911 aa11.29□□□□□ -0.6
WIPI2-208ENST00000475309 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 IMPDH2P12268 514 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 KIAA0753Q2KHM9 967 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 LRIG3Q6UXM1 1119 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 EZH1Q92800 747 aaPredicted RBP11.28□□□□□ -0.6
WIPI2-208ENST00000475309 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
WIPI2-208ENST00000475309 PPANQ9NQ55 473 aaKnown RBP11.28□□□□□ -0.6
WIPI2-208ENST00000475309 TRIM10Q9UDY6 481 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 SNX12Q9UMY4 172 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 ABCA3Q99758 1704 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 GOLGA6L10A0A0M3HER8 536 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 LRRC10BA6NIK2 292 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 FOXN1O15353 648 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 ALADP13716 330 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 CYLC1P35663 651 aaPredicted RBP11.28□□□□□ -0.6
WIPI2-208ENST00000475309 HERVK_113P62684 666 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 CUL4BQ13620 913 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
WIPI2-208ENST00000475309 MTHFD1LQ6UB35 978 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
WIPI2-208ENST00000475309 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms