RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 RNF113AO15541 343 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 TAF5LO75529 589 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 TRPA1O75762 1119 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 WISP1O95388 367 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 EDN3P14138 238 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 SYT1P21579 422 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 CASP7P55210 303 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 HMGN5P82970 282 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 FOXO4P98177 505 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 USPL1Q5W0Q7 1092 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 TTLL7Q6ZT98 887 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 ACAD11Q709F0 780 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 DDX46Q7L014 1031 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 SLC51AQ86UW1 340 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 ZBTB38Q8NAP3 1195 aaPredicted RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 JARID2Q92833 1246 aaPredicted RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 OSMRQ99650 979 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 LLPHQ9BRT6 129 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 PLA2G12BQ9BX93 195 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 PANK2Q9BZ23 570 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 IL25Q9H293 177 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 SEC31BQ9NQW1 1179 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 BTG4Q9NY30 223 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 SOX13Q9UN79 622 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 MAP3K15Q6ZN16 1313 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 JCADQ9P266 1359 aa6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF609O15014 1411 aa6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 PAPPAQ13219 1627 aa6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 NHSL1Q5SYE7 1610 aa6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 ABCA3Q99758 1704 aa6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 COL14A1Q05707 1796 aaKnown RBP6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 UBR2Q8IWV8 1755 aa6.9□□□□□ -1.31
ATPAF1-204ENST00000474020 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 A0A1B0GUL7 405 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 SYCE3A1L190 88 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 H3BRB1 525 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 FIBPO43427 364 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 DHX16O60231 1041 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 PTMAP06454 111 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 UQCRFS1P1P0C7P4 283 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 GLB1P16278 677 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 SERPINB4P48594 390 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 IMMTQ16891 758 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 METTL24Q5JXM2 366 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 USP48Q86UV5 1035 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 GPT2Q8TD30 523 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 NXPE3Q969Y0 559 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 PPP1R9BQ96SB3 815 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 TUT1Q9H6E5 874 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 CNNM1Q9NRU3 951 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 CCDC39Q9UFE4 941 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 CCDC9Q9Y3X0 531 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 LRP6O75581 1613 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 SPEF2Q9C093 1822 aa6.89□□□□□ -1.31
ATPAF1-204ENST00000474020 ERVV-1B6SEH8 477 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 TOM1O60784 492 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 MCM5P33992 734 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 PDE4CQ08493 712 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 TRDNQ13061 729 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ECM1Q16610 540 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ME3Q16798 604 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 DUOXA2Q1HG44 320 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ADCK5Q3MIX3 580 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ATG9AQ7Z3C6 839 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ZSCAN30Q86W11 494 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 GAS2L3Q86XJ1 694 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 GLYCTKQ8IVS8 523 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 DNAJC10Q8IXB1 793 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 RETREG2Q8NC44 543 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 PIGBQ92521 554 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 SYTL4Q96C24 671 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 KLHDC7BQ96G42 594 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ZNF396Q96N95 335 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 CEP41Q9BYV8 373 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 ZSCAN16Q9H4T2 348 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 TRMT112Q9UI30 125 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 CFAP45Q9UL16 551 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 TPCN1Q9ULQ1 816 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 NAP1L2Q9ULW6 460 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 CNPY2Q9Y2B0 182 aa6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 THRAP3Q9Y2W1 955 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-204ENST00000474020 XIRP1Q702N8 1843 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 NUP188Q5SRE5 1749 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ELP1O95163 1332 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 MROH5Q6ZUA9 1318 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 IRS4O14654 1257 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 DDX3YO15523 660 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 PDE8AO60658 829 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 ADAM11O75078 769 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 CCDC192P0DO97 292 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 SLC5A1P13866 664 aa6.87□□□□□ -1.31
ATPAF1-204ENST00000474020 CPA1P15085 419 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms