RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
ACTB-209ENST00000473257 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
ACTB-209ENST00000473257 DYNC1LI2O43237 492 aaPredicted RBP13.31□□□□□ -0.28
ACTB-209ENST00000473257 SMPD1P17405 629 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 STAT2P52630 851 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 PDE4BQ07343 736 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.286e-19■■□□□ 12.8
ACTB-209ENST00000473257 FAM126BQ8IXS8 530 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 TIFAQ96CG3 184 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 TRPV6Q9H1D0 765 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 PRDM12Q9H4Q4 367 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 ZNF576Q9H609 170 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 FBXO40Q9UH90 709 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 PRR12Q9ULL5 1215 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 ELP1O95163 1332 aa13.31□□□□□ -0.28
ACTB-209ENST00000473257 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
ACTB-209ENST00000473257 OAZ1P54368 228 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 CCL23P55773 120 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 NSMFQ6X4W1 530 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 TLK2Q86UE8 772 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 PCSK9Q8NBP7 692 aaKnown RBP13.3□□□□□ -0.28
ACTB-209ENST00000473257 GMCL1Q96IK5 515 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 PBX4Q9BYU1 374 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 FRMPD2Q68DX3 1309 aaPredicted RBP13.3□□□□□ -0.28
ACTB-209ENST00000473257 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
ACTB-209ENST00000473257 LCTP09848 1927 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 CD4P01730 458 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 MX1P20591 662 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 PPIGQ13427 754 aaKnown RBP eCLIP13.29□□□□□ -0.28
ACTB-209ENST00000473257 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
ACTB-209ENST00000473257 CCDC96Q2M329 555 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 GPCPD1Q9NPB8 672 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 CCPG1Q9ULG6 757 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 GNEQ9Y223 722 aaKnown RBP13.29□□□□□ -0.28
ACTB-209ENST00000473257 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
ACTB-209ENST00000473257 ERC2O15083 957 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 SLC3A2P08195 630 aaKnown RBP13.28□□□□□ -0.28
ACTB-209ENST00000473257 MYOGP15173 224 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 RABGGTBP53611 331 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 ADGRE1Q14246 886 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
ACTB-209ENST00000473257 RRP12Q5JTH9 1297 aaKnown RBP13.28□□□□□ -0.28
ACTB-209ENST00000473257 RASIP1Q5U651 963 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 RCSD1Q6JBY9 416 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 NKX2-4Q9H2Z4 354 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
ACTB-209ENST00000473257 XIRP2A4UGR9 3374 aa13.28□□□□□ -0.28
ACTB-209ENST00000473257 TRANK1O15050 2925 aa13.27□□□□□ -0.28
ACTB-209ENST00000473257 NFIBO00712 420 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 B4GALT4O60513 344 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 HAND2P61296 217 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 ITGA7Q13683 1181 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 BAATQ14032 418 aaPredicted RBP13.27□□□□□ -0.29
ACTB-209ENST00000473257 ANKRD45Q5TZF3 282 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 TMEM199Q8N511 208 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 VWCEQ96DN2 955 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 SCLYQ96I15 445 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 AP5M1Q9H0R1 490 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 WNT8AQ9H1J5 351 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 HIPK3Q9H422 1215 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 SYNPO2Q9UMS6 1093 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 MROH7Q68CQ1 1323 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
ACTB-209ENST00000473257 A0A0D9SFI3 127 aa13.26□□□□□ -0.29
ACTB-209ENST00000473257 ASB14A6NK59 587 aa13.26□□□□□ -0.29
ACTB-209ENST00000473257 TLR3O15455 904 aaKnown RBP13.26□□□□□ -0.29
ACTB-209ENST00000473257 CYP2C9P11712 490 aa13.26□□□□□ -0.29
ACTB-209ENST00000473257 KIAA1211Q6ZU35 1233 aa13.26□□□□□ -0.29
ACTB-209ENST00000473257 NOC4LQ9BVI4 516 aaKnown RBP13.26□□□□□ -0.29
ACTB-209ENST00000473257 CPVLQ9H3G5 476 aa13.26□□□□□ -0.29
ACTB-209ENST00000473257 IL23AQ9NPF7 189 aa13.26□□□□□ -0.29
ACTB-209ENST00000473257 TRMT13Q9NUP7 481 aaKnown RBP13.26□□□□□ -0.29
ACTB-209ENST00000473257 GBF1Q92538 1859 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 TMEM265A0A087WTH1 108 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 IGFBP4P22692 258 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 CALML3P27482 149 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 NKX3-2P78367 333 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
ACTB-209ENST00000473257 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 ZNF589Q86UQ0 364 aaPredicted RBP13.25□□□□□ -0.29
ACTB-209ENST00000473257 COPS5Q92905 334 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 CRBNQ96SW2 442 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms