RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	ESYT2	A0FGR8	921 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	ALAS1	P13196	640 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	TAL1	P17542	331 aa	Predicted RBP	12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	STAT3	P40763	770 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	OAZ1	P54368	228 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	KIF23	Q02241	960 aa	Predicted RBP	12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	REST	Q13127	1097 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	TMEM132B	Q14DG7	1078 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	LBX2	Q6XYB7	198 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	FAM43A	Q8N2R8	423 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	REPS2	Q8NFH8	660 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	OXER1	Q8TDS5	423 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	CUL5	Q93034	780 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	PTPN18	Q99952	460 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	GLT8D2	Q9H1C3	349 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	RIC8A	Q9NPQ8	531 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	ATP6V1D	Q9Y5K8	247 aa		12.09	□□□□□ -0.47
PUM1-208	ENST00000471894	RASSF10	A6NK89	507 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	KIF28P	B7ZC32	967 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	ATP2A1	O14983	1001 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	CYP2C8	P10632	490 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	U2AF2	P26368	475 aa	Known RBP eCLIP	12.08	□□□□□ -0.48	7e-17	■□□□□ 10.6
PUM1-208	ENST00000471894	SREBF2	Q12772	1141 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	NR5A1	Q13285	461 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	NPY5R	Q15761	445 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	SNRNP48	Q6IEG0	339 aa	Known RBP	12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	BRAP	Q7Z569	592 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	DAGLB	Q8NCG7	672 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	TNPO1	Q92973	898 aa	Known RBP	12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	TRERF1	Q96PN7	1200 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	PAGR1	Q9BTK6	254 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	TEX13B	Q9BXU2	312 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	BIN2	Q9UBW5	565 aa	Predicted RBP	12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	RABGAP1	Q9Y3P9	1069 aa		12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	COL11A1	P12107	1806 aa	Predicted RBP	12.08	□□□□□ -0.48
PUM1-208	ENST00000471894	ADAMTS3	O15072	1205 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	NOG	Q13253	232 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	TKFC	Q3LXA3	575 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	JAKMIP3	Q5VZ66	844 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	POTEE	Q6S8J3	1075 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	MCF2L2	Q86YR7	1114 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	IFNL1	Q8IU54	200 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	NOSTRIN	Q8IVI9	506 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	RASGRP4	Q8TDF6	673 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	CAPNS2	Q96L46	248 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	PARK7	Q99497	189 aa	Known RBP	12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	HOMER2	Q9NSB8	354 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	BTBD7	Q9P203	1132 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	RBPJL	Q9UBG7	517 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	ZNF214	Q9UL59	606 aa	Predicted RBP	12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	PCDHA6	Q9UN73	950 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	RIPK3	Q9Y572	518 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	PCDHA8	Q9Y5H6	950 aa		12.07	□□□□□ -0.48
PUM1-208	ENST00000471894	CCDC194	A0A1B0GVG4	234 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.06	□□□□□ -0.48
PUM1-208	ENST00000471894		M0R2N6	131 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	PEX10	O60683	326 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	AOC2	O75106	756 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	CFB	P00751	764 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	POLR2M	P0CAP2	368 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	TM4SF4	P48230	202 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	GCLC	P48506	637 aa	Predicted RBP	12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	UBE2S	Q16763	222 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	MUM1L1	Q5H9M0	696 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	FAM173B	Q6P4H8	233 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	USP17L6P	Q6QN14	398 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	PIK3AP1	Q6ZUJ8	805 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	KRT25	Q7Z3Z0	450 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	REXO1	Q8N1G1	1221 aa	Known RBP	12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	CLEC4D	Q8WXI8	215 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	TBC1D5	Q92609	795 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	ZIC5	Q96T25	663 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	SPATC1L	Q9H0A9	340 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	ZCCHC17	Q9NP64	241 aa	Known RBP	12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	RNF146	Q9NTX7	359 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	TMEM260	Q9NX78	707 aa		12.06	□□□□□ -0.48
PUM1-208	ENST00000471894	MEIS2	O14770	477 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	OPLAH	O14841	1288 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	CNMD	O75829	334 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	SLC25A27	O95847	323 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	HOXA13	P31271	388 aa	Predicted RBP	12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	DNM1	Q05193	864 aa	Known RBP	12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	TAF1C	Q15572	869 aa	Predicted RBP	12.05	□□□□□ -0.48
PUM1-208	ENST00000471894		Q3C1V9	767 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	MCTP2	Q6DN12	878 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	NCAPG2	Q86XI2	1143 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	RIOX2	Q8IUF8	465 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	SAMD3	Q8N6K7	520 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	CHST13	Q8NET6	341 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	GPRC5A	Q8NFJ5	357 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	TNFRSF25	Q93038	417 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	ZNF396	Q96N95	335 aa	Predicted RBP	12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	TXNRD2	Q9NNW7	524 aa		12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	TFIP11	Q9UBB9	837 aa	Known RBP	12.05	□□□□□ -0.48
PUM1-208	ENST00000471894	NOL7	Q9UMY1	257 aa	Known RBP	12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms