RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 RBM28Q9NW13 759 aaKnown RBP27.08■■□□□ 1.93
SUMO3-205ENST00000466861 NRBP1Q9UHY1 535 aa27.08■■□□□ 1.93
SUMO3-205ENST00000466861 CYP46A1Q9Y6A2 500 aa27.08■■□□□ 1.93
SUMO3-205ENST00000466861 ABCB11O95342 1321 aa27.08■■□□□ 1.93
SUMO3-205ENST00000466861 GJB1P08034 283 aa27.07■■□□□ 1.92
SUMO3-205ENST00000466861 FBXO11Q86XK2 927 aa27.07■■□□□ 1.92
SUMO3-205ENST00000466861 TCEANC2Q96MN5 208 aa27.07■■□□□ 1.92
SUMO3-205ENST00000466861 AMNQ9BXJ7 453 aa27.07■■□□□ 1.92
SUMO3-205ENST00000466861 FLRT1Q9NZU1 646 aa27.07■■□□□ 1.92
SUMO3-205ENST00000466861 GTF3C3Q9Y5Q9 886 aa27.07■■□□□ 1.92
SUMO3-205ENST00000466861 ZBTB43O43298 467 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 EVCP57679 992 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 MTFR1Q15390 333 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 MUM1L1Q5H9M0 696 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 Q6ZUG5 572 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 CLEC4DQ8WXI8 215 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 MYL10Q9BUA6 226 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 RNF208Q9H0X6 261 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 VAT1LQ9HCJ6 419 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 PAK6Q9NQU5 681 aaPredicted RBP27.06■■□□□ 1.92
SUMO3-205ENST00000466861 CYP39A1Q9NYL5 469 aa27.06■■□□□ 1.92
SUMO3-205ENST00000466861 LOC102724159A0A0B4J2E5 919 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 PNMA6FA0A0J9YX94 578 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 POTEB2H3BUK9 544 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 CYTH3O43739 400 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 PGK2P07205 417 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 PRKAR2AP13861 404 aaKnown RBP27.05■■□□□ 1.92
SUMO3-205ENST00000466861 CACNB2Q08289 660 aaPredicted RBP27.05■■□□□ 1.92
SUMO3-205ENST00000466861 PWP2Q15269 919 aaKnown RBP27.05■■□□□ 1.92
SUMO3-205ENST00000466861 MAMDC4Q6UXC1 1216 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 SAMD3Q8N6K7 520 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 FAM133AQ8N9E0 248 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 BRPF3Q9ULD4 1205 aa27.05■■□□□ 1.92
SUMO3-205ENST00000466861 MRPL11Q9Y3B7 192 aaKnown RBP27.05■■□□□ 1.92
SUMO3-205ENST00000466861 CPA1P15085 419 aa27.04■■□□□ 1.92
SUMO3-205ENST00000466861 SLC35G1Q2M3R5 365 aa27.04■■□□□ 1.92
SUMO3-205ENST00000466861 MICU3Q86XE3 530 aa27.04■■□□□ 1.92
SUMO3-205ENST00000466861 TINF2Q9BSI4 451 aa27.04■■□□□ 1.92
SUMO3-205ENST00000466861 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.04■■□□□ 1.92
SUMO3-205ENST00000466861 UNC93B1Q9H1C4 597 aa27.04■■□□□ 1.92
SUMO3-205ENST00000466861 SYNGAP1Q96PV0 1343 aa27.04■■□□□ 1.92
SUMO3-205ENST00000466861 KLF18A0A0U1RQI7 1052 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 CCDC196A0A1B0GTZ2 297 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 GJA8P48165 433 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 RGS19P49795 217 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 NID2Q14112 1375 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 MCF2L2Q86YR7 1114 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 BRF1Q92994 677 aa27.03■■□□□ 1.92
SUMO3-205ENST00000466861 MAP3K20Q9NYL2 800 aaKnown RBP27.03■■□□□ 1.92
SUMO3-205ENST00000466861 SEC24BO95487 1268 aa27.02■■□□□ 1.92
SUMO3-205ENST00000466861 TRIM32Q13049 653 aa27.02■■□□□ 1.92
SUMO3-205ENST00000466861 RTN1Q16799 776 aa27.02■■□□□ 1.92
SUMO3-205ENST00000466861 USH1GQ495M9 461 aa27.02■■□□□ 1.92
SUMO3-205ENST00000466861 TMTC3Q6ZXV5 915 aa27.02■■□□□ 1.92
SUMO3-205ENST00000466861 RRP36Q96EU6 259 aaKnown RBP27.02■■□□□ 1.92
SUMO3-205ENST00000466861 ALDH8A1Q9H2A2 487 aaPredicted RBP27.02■■□□□ 1.92
SUMO3-205ENST00000466861 NFIBO00712 420 aa27.01■■□□□ 1.91
SUMO3-205ENST00000466861 MSCO60682 206 aa27.01■■□□□ 1.91
SUMO3-205ENST00000466861 GHRHRQ02643 423 aa27.01■■□□□ 1.91
SUMO3-205ENST00000466861 NSMFQ6X4W1 530 aa27.01■■□□□ 1.91
SUMO3-205ENST00000466861 RNF207Q6ZRF8 634 aa27.01■■□□□ 1.91
SUMO3-205ENST00000466861 SRBD1Q8N5C6 995 aaKnown RBP27.01■■□□□ 1.91
SUMO3-205ENST00000466861 PIGSQ96S52 555 aa27.01■■□□□ 1.91
SUMO3-205ENST00000466861 ADD3Q9UEY8 706 aaKnown RBP27.01■■□□□ 1.91
SUMO3-205ENST00000466861 SGPL1O95470 568 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 CYBAP13498 195 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 RXRAP19793 462 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 CYP2C19P33261 490 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 SOX10P56693 466 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 FGD4Q96M96 766 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 SEC63Q9UGP8 760 aaKnown RBP27■■□□□ 1.91
SUMO3-205ENST00000466861 PCDHA1Q9Y5I3 950 aa27■■□□□ 1.91
SUMO3-205ENST00000466861 CENPFP49454 3210 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 ASB14A6NK59 587 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 GOLGA8AA7E2F4 631 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 GOLGA8BA8MQT2 603 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 CAPN15O75808 1086 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 PLEKHA8P1O95397 391 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 APOBRQ0VD83 1088 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 BAATQ14032 418 aaPredicted RBP26.99■■□□□ 1.91
SUMO3-205ENST00000466861 HOMER1Q86YM7 354 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 CRISPLD2Q9H0B8 497 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 PDRG1Q9NUG6 133 aa26.99■■□□□ 1.91
SUMO3-205ENST00000466861 LCTP09848 1927 aa26.98■■□□□ 1.91
SUMO3-205ENST00000466861 POTEFA5A3E0 1075 aa26.98■■□□□ 1.91
SUMO3-205ENST00000466861 PPP1R11O60927 126 aaPredicted RBP26.98■■□□□ 1.91
SUMO3-205ENST00000466861 METAP2P50579 478 aaKnown RBP eCLIP26.98■■□□□ 1.91
SUMO3-205ENST00000466861 CNTN2Q02246 1040 aa26.98■■□□□ 1.91
SUMO3-205ENST00000466861 CCDC144CPQ8IYA2 1237 aa26.98■■□□□ 1.91
SUMO3-205ENST00000466861 DNERQ8NFT8 737 aa26.98■■□□□ 1.91
SUMO3-205ENST00000466861 U2AF1L4Q8WU68 220 aaKnown RBP26.98■■□□□ 1.91
SUMO3-205ENST00000466861 ZNF274Q96GC6 653 aaPredicted RBP26.98■■□□□ 1.91
SUMO3-205ENST00000466861 UPF3BQ9BZI7 483 aaKnown RBP26.98■■□□□ 1.91
SUMO3-205ENST00000466861 MCM3APO60318 1980 aa26.98■■□□□ 1.91
SUMO3-205ENST00000466861 PTPDC1A2A3K4 754 aa26.97■■□□□ 1.91
SUMO3-205ENST00000466861 MYCP01106 439 aaPredicted RBP26.97■■□□□ 1.91
SUMO3-205ENST00000466861 TAL1P17542 331 aaPredicted RBP26.97■■□□□ 1.91
SUMO3-205ENST00000466861 RPS6P62753 249 aaKnown RBP26.97■■□□□ 1.91
SUMO3-205ENST00000466861 TOB2Q14106 344 aaPredicted RBP26.97■■□□□ 1.91
SUMO3-205ENST00000466861 ANKRD1Q15327 319 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms