RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FXR1P51114 621 aaKnown RBP eCLIP11.91□□□□□ -0.5
SF3A3-204ENST00000462258 RTP1P59025 263 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 ASPRV1Q53RT3 343 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 IFIT1BQ5T764 474 aaKnown RBP11.91□□□□□ -0.5
SF3A3-204ENST00000462258 RALYLQ86SE5 291 aaKnown RBP11.91□□□□□ -0.5
SF3A3-204ENST00000462258 ANKS1AQ92625 1134 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 CPVLQ9H3G5 476 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 PNMA2Q9UL42 364 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 FAM184BQ9ULE4 1060 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 ASB14A6NK59 587 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 ADCY6O43306 1168 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 ADCYAP1R1P41586 468 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 SNX17Q15036 470 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 CDC37Q16543 378 aaPredicted RBP11.9□□□□□ -0.5
SF3A3-204ENST00000462258 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 SKAP1Q86WV1 359 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 FERMT2Q96AC1 680 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 KATNBL1Q9H079 304 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 PHF24Q9UPV7 400 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 ATP11BQ9Y2G3 1177 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
SF3A3-204ENST00000462258 SZT2Q5T011 3432 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 A0A1W2PPC1 479 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 A0A1W2PQ45 241 aaPredicted RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 A0A1W2PQY0 241 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 E7EWF7 191 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 DUSP11O75319 330 aaKnown RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 PARP1P09874 1014 aaKnown RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 BAATQ14032 418 aaPredicted RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 SEC23AQ15436 765 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 USH1GQ495M9 461 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 TRIM60Q495X7 471 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 NCOA7Q8NI08 942 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 GDF15Q99988 308 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
SF3A3-204ENST00000462258 RBM8AQ9Y5S9 174 aaKnown RBP11.89□□□□□ -0.51
SF3A3-204ENST00000462258 MYADML2A6NDP7 307 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 CALML3P27482 149 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 CST5P28325 142 aaPredicted RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 ALDH5A1P51649 535 aaPredicted RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 SLC39A5Q6ZMH5 540 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 RNF207Q6ZRF8 634 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 ADGRF4Q8IZF3 695 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 CLEC4DQ8WXI8 215 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 ESYT1Q9BSJ8 1104 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 UPF3AQ9H1J1 476 aaKnown RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 SPC25Q9HBM1 224 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 ADD3Q9UEY8 706 aaKnown RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 PRKAG2Q9UGJ0 569 aa11.88□□□□□ -0.51
SF3A3-204ENST00000462258 DDX49Q9Y6V7 483 aaKnown RBP11.88□□□□□ -0.51
SF3A3-204ENST00000462258 ABCB11O95342 1321 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 ERICH2A1L162 156 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 BMP8BP34820 402 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 ACLYP53396 1101 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 RPS6P62753 249 aaKnown RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 SART3Q15020 963 aaKnown RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 C1orf53Q5VUE5 145 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 EEPD1Q7L9B9 569 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 TLK2Q86UE8 772 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 MB21D2Q8IYB1 491 aaPredicted RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 KLHDC9Q8NEP7 349 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 TSEN34Q9BSV6 310 aaKnown RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 PRDM5Q9NQX1 630 aaPredicted RBP11.87□□□□□ -0.51
SF3A3-204ENST00000462258 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 KIAA1217Q5T5P2 1943 aa11.87□□□□□ -0.51
SF3A3-204ENST00000462258 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 GJA9P57773 515 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
SF3A3-204ENST00000462258 MDM2Q00987 491 aaPredicted RBP11.86□□□□□ -0.51
SF3A3-204ENST00000462258 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 WTAPQ15007 396 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
SF3A3-204ENST00000462258 KCNA10Q16322 511 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 NOL8Q76FK4 1167 aaKnown RBP11.86□□□□□ -0.51
SF3A3-204ENST00000462258 CHST3Q7LGC8 479 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 STAG2Q8N3U4 1231 aa11.86□□□□□ -0.51
SF3A3-204ENST00000462258 PCSK9Q8NBP7 692 aaKnown RBP11.86□□□□□ -0.51
SF3A3-204ENST00000462258 UBE2OQ9C0C9 1292 aaKnown RBP11.86□□□□□ -0.51
SF3A3-204ENST00000462258 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms