RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 FKBP15Q5T1M5 1219 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 ZCRB1Q8TBF4 217 aaKnown RBP15.27■□□□□ 0.03
PTPRE-204ENST00000455661 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.03
PTPRE-204ENST00000455661 ZIM3Q96PE6 472 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 SH2D4AQ9H788 454 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 DISC1Q9NRI5 854 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 PCDHA13Q9Y5I0 950 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 MYH2Q9UKX2 1941 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 MTIF2P46199 727 aaKnown RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 DDR1Q08345 913 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 NPY5RQ15761 445 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 CFAP58Q5T655 872 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 YTHDF3Q7Z739 585 aaKnown RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 IFT20Q8IY31 132 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 ENAHQ8N8S7 591 aaPredicted RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 SMCR8Q8TEV9 937 aaPredicted RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 CCDC47Q96A33 483 aaKnown RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 EPN3Q9H201 632 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 MOCS3O95396 460 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 FGFR2P21802 821 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 ATP1A2P50993 1020 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 HAUS3Q68CZ6 603 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 TTI2Q6NXR4 508 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 GIGYF2Q6Y7W6 1299 aaKnown RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 KDM7AQ6ZMT4 941 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 GIMAP8Q8ND71 665 aaPredicted RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 HELBQ8NG08 1087 aaPredicted RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
PTPRE-204ENST00000455661 CAPN6Q9Y6Q1 641 aa15.26■□□□□ 0.03
PTPRE-204ENST00000455661 RHOBTB3O94955 611 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 CCDC172P0C7W6 258 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 GPTP24298 496 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 RDXP35241 583 aaKnown RBP15.25■□□□□ 0.03
PTPRE-204ENST00000455661 FNTAP49354 379 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 KLK7P49862 253 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 TMTC3Q6ZXV5 915 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 NLRP10Q86W26 655 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 CCDC155Q8N6L0 562 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 TACO1Q9BSH4 297 aaKnown RBP15.25■□□□□ 0.03
PTPRE-204ENST00000455661 LRP2BPQ9P2M1 347 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 ANAPC4Q9UJX5 808 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 RASSF10A6NK89 507 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 DDAH1O94760 285 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 CLSTN1O94985 981 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 MRPS25P82663 173 aaKnown RBP15.25■□□□□ 0.03
PTPRE-204ENST00000455661 KCTD16Q68DU8 428 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 CNOT6LQ96LI5 555 aaKnown RBP15.25■□□□□ 0.03
PTPRE-204ENST00000455661 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 MLXIPQ9HAP2 919 aa15.25■□□□□ 0.03
PTPRE-204ENST00000455661 COL18A1P39060 1754 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 MYO1FO00160 1098 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 ZNF263O14978 683 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 PDE8AO60658 829 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 LSP1P33241 339 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 MMP14P50281 582 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 NAP1L1P55209 391 aaKnown RBP15.24■□□□□ 0.03
PTPRE-204ENST00000455661 DTHD1Q6ZMT9 781 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
PTPRE-204ENST00000455661 KRT26Q7Z3Y9 468 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 SH2D3CQ8N5H7 860 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 CCDC43Q96MW1 224 aaKnown RBP15.24■□□□□ 0.03
PTPRE-204ENST00000455661 ERGIC2Q96RQ1 377 aa15.24■□□□□ 0.03
PTPRE-204ENST00000455661 SCG2P13521 617 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 CCNE1P24864 410 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 TROAPQ12815 778 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 PAK2Q13177 524 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 RNF187Q5TA31 235 aaPredicted RBP15.23■□□□□ 0.03
PTPRE-204ENST00000455661 NAA35Q5VZE5 725 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 TYW1BQ6NUM6 668 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 P2RX5Q93086 422 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 DUSP9Q99956 384 aaKnown RBP15.23■□□□□ 0.03
PTPRE-204ENST00000455661 RNF14Q9UBS8 474 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 TRMT112Q9UI30 125 aaKnown RBP15.23■□□□□ 0.03
PTPRE-204ENST00000455661 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 ALS2Q96Q42 1657 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 KLRC4O43908 158 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 AKR1B10O60218 316 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 KRT14P02533 472 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 CALML3P27482 149 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 CXCR5P32302 372 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 UBA7P41226 1012 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 PPP1R2P41236 205 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 KIF11P52732 1056 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 CFAP221Q4G0U5 840 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 C2CD5Q86YS7 1000 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 ZNF473Q8WTR7 871 aaKnown RBP15.23■□□□□ 0.03
PTPRE-204ENST00000455661 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
PTPRE-204ENST00000455661 PSMB7Q99436 277 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 JPH2Q9BR39 696 aaPredicted RBP15.23■□□□□ 0.03
PTPRE-204ENST00000455661 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
PTPRE-204ENST00000455661 CNTNAP5Q8WYK1 1306 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 CHUKO15111 745 aa15.22■□□□□ 0.03
PTPRE-204ENST00000455661 PPP1R37O75864 691 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms