RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
HMGN3P1-201ENST00000453847 MYH16Q9H6N6 1097 aa5.61□□□□□ -1.51
HMGN3P1-201ENST00000453847 ARNT2Q9HBZ2 717 aa5.61□□□□□ -1.51
HMGN3P1-201ENST00000453847 PRDM10Q9NQV6 1147 aa5.61□□□□□ -1.51
HMGN3P1-201ENST00000453847 C1GALT1Q9NS00 363 aa5.61□□□□□ -1.51
HMGN3P1-201ENST00000453847 SAMD15Q9P1V8 674 aa5.61□□□□□ -1.51
HMGN3P1-201ENST00000453847 FZD9O00144 591 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 ARVCFO00192 962 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 SIGLEC6O43699 453 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 EIF5BO60841 1220 aaKnown RBP5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 LEFTY1O75610 366 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 PRAMEF1O95521 474 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 RAB6AP20340 208 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 RAC1P63000 192 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 AMPD2Q01433 879 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 ANKRD34AQ69YU3 496 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 FDX2Q6P4F2 183 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 Q6ZNB5 142 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 Q6ZS46 218 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 UBE2R2Q712K3 238 aaPredicted RBP5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 CCAR1Q8IX12 1150 aaKnown RBP5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 TCEAL8Q8IYN2 117 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 OR2W6PQ8NHA6 318 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 PCDH19Q8TAB3 1148 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 FBLIM1Q8WUP2 373 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 USP7Q93009 1102 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 AASDHPPTQ9NRN7 309 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 NOB1Q9ULX3 412 aaKnown RBP5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 DAGLAQ9Y4D2 1042 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 ST14Q9Y5Y6 855 aa5.6□□□□□ -1.51
HMGN3P1-201ENST00000453847 SHISA3A0PJX4 238 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 WDR64B1ANS9 1081 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 K7ESF4 209 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 AQP7O14520 342 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 AURKAO14965 403 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 PYGMP11217 842 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 LCP1P13796 627 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 YBX3P16989 372 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 FLT3P36888 993 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 ETV3P41162 512 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 SCNN1BP51168 640 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 MECP2P51608 486 aaKnown RBP5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 ERVK-21P61565 698 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 GUCY1A3Q02108 690 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 CDK5R2Q13319 367 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 SGO2Q562F6 1265 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 FAM102BQ5T8I3 360 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 CREB3L3Q68CJ9 461 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 CCSAPQ6IQ19 270 aaPredicted RBP5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 PASD1Q8IV76 773 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 SMC5Q8IY18 1101 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 DTWD2Q8NBA8 298 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 MORC4Q8TE76 937 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 FAM46AQ96IP4 442 aaKnown RBP5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 FCRL3Q96P31 734 aaPredicted RBP5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 CAMKK2Q96RR4 588 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 RPS6KC1Q96S38 1066 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 PHF20Q9BVI0 1012 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 CHST7Q9NS84 486 aa5.59□□□□□ -1.51
HMGN3P1-201ENST00000453847 B4E1Z4 1266 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 MEIS1O00470 390 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 CAND2O75155 1236 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 RFPL1O75677 317 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 FBXO21O94952 628 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 FKBP9O95302 570 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 ELNP15502 786 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 ATF3P18847 181 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 ITIH2P19823 946 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 GPR85P60893 370 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 GRIK4Q16099 956 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 ACBD5Q5T8D3 534 aaPredicted RBP5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 NXNQ6DKJ4 435 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 FKBP9P1Q75LS8 142 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 PPIL6Q8IXY8 311 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 CCDC136Q96JN2 1154 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 SPTLC3Q9NUV7 552 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 ZNF180Q9UJW8 692 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 COQ6Q9Y2Z9 468 aa5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 SF3B6Q9Y3B4 125 aaKnown RBP5.58□□□□□ -1.52
HMGN3P1-201ENST00000453847 C2orf71A6NGG8 1288 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 PRR33A8MZF0 331 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 STXBP3O00186 592 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 IFNGR1P15260 489 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 ATP2A2P16615 1042 aaKnown RBP5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 ZSCAN20P17040 1043 aaPredicted RBP5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 USP11P51784 963 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 BIRC2Q13490 618 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 MLC1Q15049 377 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 ABCB5Q2M3G0 1257 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 GORABQ5T7V8 394 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 ZNF385CQ66K41 422 aaPredicted RBP5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 CRTC3Q6UUV7 619 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 RSPO2Q6UXX9 243 aaPredicted RBP5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 LBX2Q6XYB7 198 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 OVCH1Q7RTY7 1134 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 ZBTB46Q86UZ6 589 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 IFNL3Q8IZI9 196 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms