RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PARNO95453 639 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 MBD3O95983 291 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 GSTP1P09211 210 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 NBPF7P0C2Y1 421 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 CPB1P15086 417 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 SELPP16109 830 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 GPTP24298 496 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 USP8P40818 1118 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 GPS2Q13227 327 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PDE3AQ14432 1141 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 NEDD9Q14511 834 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 TCEA2Q15560 299 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 LRRFIP1Q32MZ4 808 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PREPLQ4J6C6 727 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 DALRD3Q5D0E6 543 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 NAIF1Q69YI7 327 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 MRM1Q6IN84 353 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 KCNV1Q6PIU1 500 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 C6orf15Q6UXA7 325 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 TADA2BQ86TJ2 420 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 SYNPOQ8N3V7 929 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 TAB3Q8N5C8 712 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 NEK11Q8NG66 645 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 HDAC7Q8WUI4 952 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 TCP11Q8WWU5 503 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 KCNN1Q92952 543 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 TNFRSF25Q93038 417 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZNF396Q96N95 335 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PLEKHG4BQ96PX9 1271 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PLVAPQ9BX97 442 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 C22orf23Q9BZE7 217 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 UBA5Q9GZZ9 404 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 IRF2BPLQ9H1B7 796 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 HOMER3Q9NSC5 361 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 CHCHD3Q9NX63 227 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ABCF2Q9UG63 623 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PFDN2Q9UHV9 154 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZMYM5Q9UJ78 669 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRIM33Q9UPN9 1127 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 RIPOR2Q9Y4F9 1068 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 LRRFIP2Q9Y608 721 aaKnown RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 PTCH2Q9Y6C5 1203 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ELOA3CA0A087WX78 387 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ELOA3DA6NLF2 546 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 UPK3BL1B0FP48 263 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 UPK3BL2E5RIL1 263 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SOX1O00570 391 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 IGHDP01880 384 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 PECAM1P16284 738 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ITGB7P26010 798 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 CDK8P49336 464 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 RAB27AP51159 221 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SSRP1Q08945 709 aaKnown RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 AP3B2Q13367 1082 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 TMED1Q13445 227 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 IKBKEQ14164 716 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 DOC2BQ14184 412 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 TAF7Q15545 349 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ELOA3BQ3SY89 546 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 FILIP1LQ4L180 1135 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 DUSP27Q5VZP5 1158 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 MAP1SQ66K74 1059 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 TTC19Q6DKK2 380 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 RCSD1Q6JBY9 416 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 LRRC31Q6UY01 552 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SDCCAG8Q86SQ7 713 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 FAM35AQ86V20 835 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ERC1Q8IUD2 1116 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 MICALL1Q8N3F8 863 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 Q8N3U1 123 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 MAB21L3Q8N8X9 362 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ELOA3Q8NG57 546 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ATL2Q8NHH9 583 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 MAGEC3Q8TD91 643 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 DDX54Q8TDD1 881 aaKnown RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 TMEM40Q8WWA1 233 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 PSMG3-AS1Q96PY0 264 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 ARPC5LQ9BPX5 153 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 LPIN3Q9BQK8 851 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 MTA3Q9BTC8 594 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRIM6Q9C030 488 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 LACRTQ9GZZ8 138 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 FAM107BQ9H098 131 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SMG9Q9H0W8 520 aaKnown RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SH2B1Q9NRF2 756 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 NAGPAQ9UK23 515 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 PYCARDQ9ULZ3 195 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SLC6A14Q9UN76 642 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 NKTRP30414 1462 aaKnown RBP4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 SNAPC4Q5SXM2 1469 aa4.16□□□□□ -1.74
HMGB3P8-201ENST00000449709 POLR3AO14802 1390 aaPredicted RBP4.15□□□□□ -1.74
HMGB3P8-201ENST00000449709 PTPRKQ15262 1439 aa4.15□□□□□ -1.74
HMGB3P8-201ENST00000449709 FGD6Q6ZV73 1430 aa4.15□□□□□ -1.74
HMGB3P8-201ENST00000449709 CDKL5O76039 1030 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 HTR3BO95264 441 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 ASMTLO95671 621 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 PDGFRBP09619 1106 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms