RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 STKLD1Q8NE28 680 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 FBF1Q8TES7 1133 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 TIPINQ9BVW5 301 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF148Q9UQR1 794 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 A0A1B0GTH6 734 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 TMEM247A6NEH6 219 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 ATP9BO43861 1147 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 YEATS4O95619 227 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 CASP14P31944 242 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF131P52739 623 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 PUS10Q3MIT2 529 aaKnown RBP11.84□□□□□ -0.51
LINC00342-202ENST00000448494 FOXB2Q5VYV0 432 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 CCDC43Q96MW1 224 aaKnown RBP11.84□□□□□ -0.51
LINC00342-202ENST00000448494 CARD9Q9H257 536 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 HAUS4Q9H6D7 363 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 ADAM22Q9P0K1 906 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.51
LINC00342-202ENST00000448494 ABL1P00519 1130 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 ATP1A1P05023 1023 aaKnown RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 MLH1P40692 756 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 VAV2P52735 878 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 PLOD1Q02809 727 aaPredicted RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 RBL2Q08999 1139 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 LSAMPQ13449 338 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 LRIG3Q6UXM1 1119 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 ZNF662Q6ZS27 426 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 CTNNBL1Q8WYA6 563 aaPredicted RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 COMMD3-BMI1R4GMX3 469 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 AFF2P51816 1311 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 JCADQ9P266 1359 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 PDHA1P08559 390 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 CMA1P23946 247 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 CD97P48960 835 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 RAPGEF5Q92565 580 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 TCHPQ9BT92 498 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 CCDC28BQ9BUN5 200 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 MIS12Q9H081 205 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC00342-202ENST00000448494 STIM2Q9P246 746 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
LINC00342-202ENST00000448494 EIF4E1BA6NMX2 242 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 BIRC5O15392 142 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 P4HA2O15460 535 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 ASAP2O43150 1006 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 NEK2P51955 445 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 BIRC3Q13489 604 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 KRT72Q14CN4 511 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 CYP26C1Q6V0L0 522 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 LINC00301Q8NCQ3 95 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 ENOX1Q8TC92 643 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 WDR60Q8WVS4 1066 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 IRGQQ8WZA9 623 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 IQCDQ96DY2 449 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 CAPZA3Q96KX2 299 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 PDP2Q9P2J9 529 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 ZMYM6O95789 1325 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 DIAPH1O60610 1272 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 C2orf54Q08AI8 447 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 CCDC129Q6ZRS4 1044 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 FNBP4Q8N3X1 1017 aaPredicted RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 GBP5Q96PP8 586 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 NAP1L3Q99457 506 aaPredicted RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 DACH1Q9UI36 760 aa11.82□□□□□ -0.52
LINC00342-202ENST00000448494 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
LINC00342-202ENST00000448494 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 VWDEQ8N2E2 1590 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 BCL9O00512 1426 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 PDE2AO00408 941 aaPredicted RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 WDR46O15213 610 aaKnown RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 HNRNPCP07910 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00342-202ENST00000448494 CA8P35219 290 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 KRT9P35527 623 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 PBX1P40424 430 aa11.81□□□□□ -0.52
LINC00342-202ENST00000448494 PEX5P50542 639 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms