RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SLAMF8Q9P0V8 285 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 PTCH2Q9Y6C5 1203 aa6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 OAS3Q9Y6K5 1087 aaKnown RBP6.79□□□□□ -1.32
HMGB3P6-201ENST00000444896 THBDP07204 575 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 SNRPB2P08579 225 aaKnown RBP6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 ECI1P42126 302 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 SLC35F1Q5T1Q4 408 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 NSMFQ6X4W1 530 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 ABI1Q8IZP0 508 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 SYTL4Q96C24 671 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 PTCHD1Q96NR3 888 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 TMEM59LQ9UK28 342 aa6.78□□□□□ -1.32
HMGB3P6-201ENST00000444896 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 MAP4K2Q12851 820 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 ZNF792Q3KQV3 632 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 EEF1DP3Q658K8 133 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 SCUBE1Q8IWY4 988 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 MAP6Q96JE9 813 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 HHIPL1Q96JK4 782 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 FCRL2Q96LA5 508 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 DHRS4Q9BTZ2 278 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 TMEM260Q9NX78 707 aa6.77□□□□□ -1.33
HMGB3P6-201ENST00000444896 TRBV23-1A0A0A0MS06 115 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 NOTOA8MTQ0 251 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 FADS2P1A8MWK0 482 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 CPP00450 1065 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 PLS3P13797 630 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 ENDOUP21128 410 aaKnown RBP6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 KCNJ6P48051 423 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 SEPHS1P49903 392 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 HK2P52789 917 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 ERVFC1P60507 584 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 NTRK3Q16288 839 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 ZSWIM2Q8NEG5 633 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 CLEC1BQ9P126 229 aa6.76□□□□□ -1.33
HMGB3P6-201ENST00000444896 CADPSQ9ULU8 1353 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 BLACEA4D250 179 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 TMEM67Q5HYA8 995 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 ZC3H12BQ5HYM0 836 aaKnown RBP6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 CCDC103Q8IW40 242 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 KCTD13Q8WZ19 329 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 SLC26A8Q96RN1 970 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 CDC6Q99741 560 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 RC3H2Q9HBD1 1191 aaKnown RBP6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 TNFRSF10DQ9UBN6 386 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 CTNND2Q9UQB3 1225 aa6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 MRPS23Q9Y3D9 190 aaKnown RBP6.75□□□□□ -1.33
HMGB3P6-201ENST00000444896 BIN1O00499 593 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 EFEMP2O95967 443 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 C6orf222P0C671 652 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 GDNFP39905 211 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 KIR2DL1P43626 348 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 KIR2DL2P43627 348 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 DUSP4Q13115 394 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 TESK1Q15569 626 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 INF2Q27J81 1249 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 ACBD5Q5T8D3 534 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 MBLAC2Q68D91 279 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 SDE2Q6IQ49 451 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 CBLL1Q75N03 491 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 SLCO6A1Q86UG4 719 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 CPNE8Q86YQ8 564 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 KSR1Q8IVT5 923 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 PDZD8Q8NEN9 1154 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 MMP19Q99542 508 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 FANCLQ9NW38 375 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 NPFFR2Q9Y5X5 522 aa6.74□□□□□ -1.33
HMGB3P6-201ENST00000444896 ENPP3O14638 875 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 USP2O75604 605 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 TBC1D8O95759 1140 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 HPXP02790 462 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 PAMP19021 973 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 HLA-DQA1Q5Y7H0 255 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 CYP2R1Q6VVX0 501 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 NAT16Q8N8M0 369 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 ANKS4BQ8N8V4 417 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 JMJD8Q96S16 334 aa6.73□□□□□ -1.33
HMGB3P6-201ENST00000444896 CCDC163A0A0D9SF12 145 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 NPHP3-ACAD11A0A0J9YXS1 232 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 PPP1R12AO14974 1030 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 PPP1R11O60927 126 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 LCP1P13796 627 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 TRHRP34981 398 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 KIR3DS1Q14943 382 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 TIGD5Q53EQ6 642 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 E4F1Q66K89 784 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 PPIL6Q8IXY8 311 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 CCDC120Q96HB5 630 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 ADGRE2Q9UHX3 823 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 ASXL2Q76L83 1435 aa6.72□□□□□ -1.33
HMGB3P6-201ENST00000444896 A0A1W2PQ45 241 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 A0A1W2PQY0 241 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms