RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CLIP3Q96DZ5 547 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 KLHDC7BQ96G42 594 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 NUP88Q99567 741 aaPredicted RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 NAP1L4Q99733 375 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 ELAC2Q9BQ52 826 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 PPCSQ9HAB8 311 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 CYP26B1Q9NR63 512 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 NXF1Q9UBU9 619 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHA9Q9Y5H5 950 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 ARVCFO00192 962 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 TRAF5O00463 557 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 AQP7O14520 342 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 KCNH1O95259 989 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 MT-CO1P00395 513 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 LTFP02788 710 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 CT47B1P0C2W7 299 aaPredicted RBP6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 ITGA4P13612 1032 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 ADH6P28332 368 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 GRIK1P39086 918 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 ZNF445P59923 1031 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 IL2P60568 153 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 ATP13A4Q4VNC1 1196 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 GPR158Q5T848 1215 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 PRAMEF13Q5VWM6 474 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 FAM117BQ6P1L5 589 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 C20orf204Q6ZNR8 217 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 RNF214Q8ND24 703 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 C1orf162Q8NEQ5 155 aaPredicted RBP6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 DCAF4Q8WV16 495 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 CARD10Q9BWT7 1032 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 MKRN2Q9H000 416 aaKnown RBP6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 CRIM1Q9NZV1 1036 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 DDX20Q9UHI6 824 aaKnown RBP6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 PPP1R9AQ9ULJ8 1098 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 STARD13Q9Y3M8 1113 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 FHOD1Q9Y613 1164 aa6.69□□□□□ -1.34
TM9SF3-202ENST00000443638 ULK1O75385 1050 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 RGS9O75916 674 aaPredicted RBP6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 NEFMP07197 916 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 BMP4P12644 408 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 BDNFP23560 247 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 MECP2P51608 486 aaKnown RBP6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 ODF1Q14990 250 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 SAFBQ15424 915 aaKnown RBP eCLIP6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 PRSS53Q2L4Q9 553 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 COBLL1Q53SF7 1204 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 CREB3L3Q68CJ9 461 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 PCGF5Q86SE9 256 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 KLHL23Q8NBE8 558 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 KREMEN2Q8NCW0 462 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 DNAJB8Q8NHS0 232 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 SYTL5Q8TDW5 730 aaPredicted RBP6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 GJA10Q969M2 543 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 AHCYL2Q96HN2 611 aaKnown RBP6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA12O60330 932 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 ADAM11O75078 769 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 CPP00450 1065 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 CKMP06732 381 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 SNRPB2P08579 225 aaKnown RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 YBX3P16989 372 aaKnown RBP eCLIP6.67□□□□□ -1.341e-12■■□□□ 12.8
TM9SF3-202ENST00000443638 NAT1P18440 290 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 GJA9P57773 515 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 KRT72Q14CN4 511 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 SUZ12Q15022 739 aaKnown RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 TESK1Q15569 626 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 ILDR2Q71H61 639 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 ENAHQ8N8S7 591 aaPredicted RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 IGSF22Q8N9C0 903 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 CLRN3Q8NCR9 226 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 IRF7Q92985 503 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 TTC17Q96AE7 1141 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 FAXDC2Q96IV6 333 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 USP26Q9BXU7 913 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 B4GALT6Q9UBX8 382 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PUF60Q9UHX1 559 aaKnown RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 RCAN3Q9UKA8 241 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 DIS3Q9Y2L1 958 aaKnown RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 LAS1LQ9Y4W2 734 aaKnown RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA9Q9Y5G4 932 aaKnown RBP6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA8Q9Y5G5 932 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA7Q9Y5G6 932 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA6Q9Y5G7 932 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA3Q9Y5H0 932 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHGA2Q9Y5H1 932 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 RPS6KL1Q9Y6S9 549 aa6.67□□□□□ -1.34
TM9SF3-202ENST00000443638 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 TRIM75PA6NK02 468 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 RASSF10A6NK89 507 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 ELOA3DA6NLF2 546 aaPredicted RBP6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 WDR64B1ANS9 1081 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 GPR25O00155 361 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 MAFGO15525 162 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 COL6A1P12109 1028 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 ATP2A2P16615 1042 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms