RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 CYTH3O43739 400 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 DHX16O60231 1041 aaKnown RBP18.3■□□□□ 0.52
ACTB-206ENST00000443528 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
ACTB-206ENST00000443528 MLLT1Q03111 559 aaPredicted RBP18.3■□□□□ 0.52
ACTB-206ENST00000443528 USH1GQ495M9 461 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 LHX8Q68G74 356 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 MAMDC4Q6UXC1 1216 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 NSMFQ6X4W1 530 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
ACTB-206ENST00000443528 PFASO15067 1338 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 SOWAHBA6NEL2 793 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 POTEB2H3BUK9 544 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 PPP1R11O60927 126 aaPredicted RBP18.29■□□□□ 0.52
ACTB-206ENST00000443528 RXRAP19793 462 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 ZNF467Q7Z7K2 595 aaPredicted RBP18.29■□□□□ 0.52
ACTB-206ENST00000443528 RAB11FIP4Q86YS3 637 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
ACTB-206ENST00000443528 BRPF3Q9ULD4 1205 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 SLC12A7Q9Y666 1083 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 TNRC18O15417 2968 aaPredicted RBP18.29■□□□□ 0.52
ACTB-206ENST00000443528 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
ACTB-206ENST00000443528 ASTN1O14525 1302 aa18.28■□□□□ 0.52
ACTB-206ENST00000443528 ZBTB5O15062 677 aa18.28■□□□□ 0.52
ACTB-206ENST00000443528 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
ACTB-206ENST00000443528 TFRCP02786 760 aaKnown RBP18.28■□□□□ 0.52
ACTB-206ENST00000443528 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
ACTB-206ENST00000443528 BLOC1S2Q6QNY1 142 aa18.28■□□□□ 0.52
ACTB-206ENST00000443528 UBE2Q1Q7Z7E8 422 aa18.28■□□□□ 0.52
ACTB-206ENST00000443528 FBXO11Q86XK2 927 aa18.28■□□□□ 0.52
ACTB-206ENST00000443528 CTCFLQ8NI51 663 aaPredicted RBP18.28■□□□□ 0.52
ACTB-206ENST00000443528 PURBQ96QR8 312 aaKnown RBP18.28■□□□□ 0.52
ACTB-206ENST00000443528 PIGSQ96S52 555 aa18.28■□□□□ 0.52
ACTB-206ENST00000443528 ABCB11O95342 1321 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 SYNGAP1Q96PV0 1343 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 CALM1P0DP23 149 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 CALM2P0DP24 149 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 CALM3P0DP25 149 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 CNGA1P29973 690 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 KIF5BP33176 963 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 APOA5Q6Q788 366 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 CCDC144CPQ8IYA2 1237 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 DDX20Q9UHI6 824 aaKnown RBP18.27■□□□□ 0.52
ACTB-206ENST00000443528 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 OGDHLQ9ULD0 1010 aa18.27■□□□□ 0.52
ACTB-206ENST00000443528 MKI67P46013 3256 aaKnown RBP18.26■□□□□ 0.51
ACTB-206ENST00000443528 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 PLEKHA8P1O95397 391 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 ZNF865P0CJ78 1059 aaPredicted RBP18.26■□□□□ 0.51
ACTB-206ENST00000443528 CAPN2P17655 700 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
ACTB-206ENST00000443528 PSMA5P28066 241 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 Q6ZUG5 572 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 SRBD1Q8N5C6 995 aaKnown RBP18.26■□□□□ 0.51
ACTB-206ENST00000443528 FANCBQ8NB91 859 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 RGS22Q8NE09 1264 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 TBC1D5Q92609 795 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
ACTB-206ENST00000443528 SEPT4O43236 478 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 SEC24BO95487 1268 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 SMARCA1P28370 1054 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 MNX1P50219 401 aaPredicted RBP18.25■□□□□ 0.51
ACTB-206ENST00000443528 RPS6P62753 249 aaKnown RBP18.25■□□□□ 0.51
ACTB-206ENST00000443528 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 ARMCX2Q7L311 632 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
ACTB-206ENST00000443528 FBXL16Q8N461 479 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 AGXT2Q9BYV1 514 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
ACTB-206ENST00000443528 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.25■□□□□ 0.51
ACTB-206ENST00000443528 DDX49Q9Y6V7 483 aaKnown RBP18.25■□□□□ 0.51
ACTB-206ENST00000443528 PNMA6FA0A0J9YX94 578 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 KLF18A0A0U1RQI7 1052 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 OPLAHO14841 1288 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 CALML3P27482 149 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 GNAQP50148 359 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 SYNE3Q6ZMZ3 975 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 TMTC3Q6ZXV5 915 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 PIBF1Q8WXW3 757 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 BRF1Q92994 677 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 LZTS2Q9BRK4 669 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 CNPY2Q9Y2B0 182 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
ACTB-206ENST00000443528 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
ACTB-206ENST00000443528 LCTP09848 1927 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 ASB14A6NK59 587 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 ZBTB43O43298 467 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 MSCO60682 206 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 FARP2O94887 1054 aaPredicted RBP18.23■□□□□ 0.51
ACTB-206ENST00000443528 FGD1P98174 961 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 APOBRQ0VD83 1088 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 RUFY3Q7L099 469 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms