RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NRAPQ86VF7 1730 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 IDEP14735 1019 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 IRX1P78414 480 aaPredicted RBP18.7■□□□□ 0.58
PMS1-213ENST00000441310 CDKAL1Q5VV42 579 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 ZIM3Q96PE6 472 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 ZSWIM5Q9P217 1185 aa18.7■□□□□ 0.58
PMS1-213ENST00000441310 KRT31Q15323 416 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 CCDC121Q6ZUS5 278 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 NLRP14Q86W24 1093 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 TPX2Q9ULW0 747 aaKnown RBP18.69■□□□□ 0.58
PMS1-213ENST00000441310 SPEF2Q9C093 1822 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 E7EVH7 732 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 GCKP35557 465 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 HERVK_113P62684 666 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 C11orf91Q3C1V1 193 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 YTHDF3Q7Z739 585 aaKnown RBP18.69■□□□□ 0.58
PMS1-213ENST00000441310 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
PMS1-213ENST00000441310 MACROD2A1Z1Q3 448 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 IFIT3O14879 490 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 RTN2O75298 545 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 PEX19P40855 299 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 METAP2P50579 478 aaKnown RBP eCLIP18.68■□□□□ 0.58
PMS1-213ENST00000441310 SLC4A8Q2Y0W8 1093 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 CMTR1Q8N1G2 835 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 MYCBPAPQ8TBZ2 947 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 PES1O00541 588 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 PTGISQ16647 500 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 MEX3CQ5U5Q3 659 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 PPANQ9NQ55 473 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 GOLGA6L7A0A1B0GV03 622 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 INHBEP58166 350 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 DYNLL1P63167 89 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 FUKQ8N0W3 1084 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 PSMB7Q99436 277 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 RBM28Q9NW13 759 aaKnown RBP18.68■□□□□ 0.58
PMS1-213ENST00000441310 SMARCAL1Q9NZC9 954 aa18.68■□□□□ 0.58
PMS1-213ENST00000441310 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 A6NNZ2 444 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 ACTN4O43707 911 aaKnown RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 PPP1R37O75864 691 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 CUL4BQ13620 913 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 SPRED3Q2MJR0 410 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 TUBB8Q3ZCM7 444 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 DUSP10Q9Y6W6 482 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 MYH7P12883 1935 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 GOLGB1Q14789 3259 aaKnown RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 EME2A4GXA9 379 aaPredicted RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 OPLAHO14841 1288 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 EPB41P11171 864 aaKnown RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 TMED8Q6PL24 325 aaPredicted RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 STAMQ92783 540 aa18.67■□□□□ 0.58
PMS1-213ENST00000441310 ARHGEF1Q92888 912 aaKnown RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 FBXO2Q9UK22 296 aaPredicted RBP18.67■□□□□ 0.58
PMS1-213ENST00000441310 BTBD18B2RXH4 712 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 SH2B2O14492 632 aaPredicted RBP18.66■□□□□ 0.58
PMS1-213ENST00000441310 IQCEQ6IPM2 695 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 APOA5Q6Q788 366 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 CALR3Q96L12 384 aaKnown RBP18.66■□□□□ 0.58
PMS1-213ENST00000441310 NLRP3Q96P20 1036 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 LACRTQ9GZZ8 138 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 ITIH6Q6UXX5 1313 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 PLCB4Q15147 1175 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 TBC1D31Q96DN5 1066 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
PMS1-213ENST00000441310 PRDM1O75626 825 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 EPHB4P54760 987 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 RPS8P62241 208 aaKnown RBP18.66■□□□□ 0.58
PMS1-213ENST00000441310 DPYDQ12882 1025 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 ALS2CLQ60I27 953 aa18.66■□□□□ 0.58
PMS1-213ENST00000441310 FAM84BQ96KN1 310 aaPredicted RBP18.66■□□□□ 0.58
PMS1-213ENST00000441310 CCDC43Q96MW1 224 aaKnown RBP18.66■□□□□ 0.58
PMS1-213ENST00000441310 RCCD1A6NED2 376 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 NR1D1P20393 614 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 COPB1P53618 953 aaKnown RBP18.65■□□□□ 0.58
PMS1-213ENST00000441310 CAVIN4Q5BKX8 364 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 IGDCC4Q8TDY8 1250 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 KIF9Q9HAQ2 790 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 ZBTB43O43298 467 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 KRT86O43790 486 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 RPS6KA4O75676 772 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 PTPREP23469 700 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 HPDP32754 393 aaPredicted RBP18.65■□□□□ 0.58
PMS1-213ENST00000441310 UBXN1Q04323 297 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 NBPF20Q3BBV1 942 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 KDM7AQ6ZMT4 941 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 ELOA2Q8IYF1 753 aaPredicted RBP18.65■□□□□ 0.58
PMS1-213ENST00000441310 BSDC1Q9NW68 430 aaPredicted RBP18.65■□□□□ 0.58
PMS1-213ENST00000441310 EHD2Q9NZN4 543 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
PMS1-213ENST00000441310 TTC26A0AVF1 554 aa18.64■□□□□ 0.58
PMS1-213ENST00000441310 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.58
PMS1-213ENST00000441310 TOB1P50616 345 aaPredicted RBP18.64■□□□□ 0.58
PMS1-213ENST00000441310 SF3B3Q15393 1217 aaKnown RBP18.64■□□□□ 0.58
PMS1-213ENST00000441310 ZKSCAN8Q15776 578 aaPredicted RBP18.64■□□□□ 0.58
PMS1-213ENST00000441310 ACCSLQ4AC99 568 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms