RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PCP11498 1178 aaKnown RBP24.47■■□□□ 1.51
CPNE1-219ENST00000440240 SNAP25P60880 206 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 IRX5P78411 483 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-219ENST00000440240 RRP12Q5JTH9 1297 aaKnown RBP24.47■■□□□ 1.51
CPNE1-219ENST00000440240 BTNL9Q6UXG8 535 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 SEMA6BQ9H3T3 888 aa24.47■■□□□ 1.51
CPNE1-219ENST00000440240 ZMYM6O95789 1325 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 EPHB4P54760 987 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 MUM1L1Q5H9M0 696 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 TTC14Q96N46 770 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 TMEM47Q9BQJ4 181 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 LNPKQ9C0E8 428 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 RWDD1Q9H446 243 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-219ENST00000440240 TBX21Q9UL17 535 aa24.46■■□□□ 1.51
CPNE1-219ENST00000440240 MFAP1P55081 439 aaKnown RBP24.45■■□□□ 1.5
CPNE1-219ENST00000440240 NMIQ13287 307 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-219ENST00000440240 IQSEC1Q6DN90 963 aa24.45■■□□□ 1.5
CPNE1-219ENST00000440240 NSMFQ6X4W1 530 aa24.45■■□□□ 1.5
CPNE1-219ENST00000440240 RILPL2Q969X0 211 aa24.45■■□□□ 1.5
CPNE1-219ENST00000440240 AP5M1Q9H0R1 490 aa24.45■■□□□ 1.5
CPNE1-219ENST00000440240 RANBP17Q9H2T7 1088 aaKnown RBP24.45■■□□□ 1.5
CPNE1-219ENST00000440240 PNMA2Q9UL42 364 aa24.45■■□□□ 1.5
CPNE1-219ENST00000440240 GNEQ9Y223 722 aaKnown RBP24.45■■□□□ 1.5
CPNE1-219ENST00000440240 MCM3APO60318 1980 aa24.45■■□□□ 1.5
CPNE1-219ENST00000440240 CTAGE5O15320 804 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 TLR3O15455 904 aaKnown RBP24.44■■□□□ 1.5
CPNE1-219ENST00000440240 CABYRO75952 493 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 SLC16A2P36021 539 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 SYDE2Q5VT97 1194 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 MFSD5Q6N075 450 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 MFSD6Q6ZSS7 791 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 RASGRP2Q7LDG7 609 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 CDX2Q99626 313 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-219ENST00000440240 ADD3Q9UEY8 706 aaKnown RBP24.44■■□□□ 1.5
CPNE1-219ENST00000440240 Q9Y3F1 56 aa24.44■■□□□ 1.5
CPNE1-219ENST00000440240 CCDC171Q6TFL3 1326 aa24.43■■□□□ 1.5
CPNE1-219ENST00000440240 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-219ENST00000440240 ZEB2O60315 1214 aa24.43■■□□□ 1.5
CPNE1-219ENST00000440240 AKNAD1Q5T1N1 836 aa24.43■■□□□ 1.5
CPNE1-219ENST00000440240 TTBK2Q6IQ55 1244 aa24.43■■□□□ 1.5
CPNE1-219ENST00000440240 ZNF589Q86UQ0 364 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-219ENST00000440240 SMC5Q8IY18 1101 aa24.43■■□□□ 1.5
CPNE1-219ENST00000440240 SEZ6LQ9BYH1 1024 aa24.43■■□□□ 1.5
CPNE1-219ENST00000440240 RNF41Q9H4P4 317 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-219ENST00000440240 ASTN1O14525 1302 aa24.42■■□□□ 1.5
CPNE1-219ENST00000440240 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-219ENST00000440240 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-219ENST00000440240 DYNC1LI2O43237 492 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-219ENST00000440240 BEX3Q00994 111 aa24.42■■□□□ 1.5
CPNE1-219ENST00000440240 FSCN1Q16658 493 aaKnown RBP24.42■■□□□ 1.5
CPNE1-219ENST00000440240 TLK2Q86UE8 772 aa24.42■■□□□ 1.5
CPNE1-219ENST00000440240 FAM126BQ8IXS8 530 aa24.42■■□□□ 1.5
CPNE1-219ENST00000440240 TMEM199Q8N511 208 aa24.42■■□□□ 1.5
CPNE1-219ENST00000440240 VTA1Q9NP79 307 aa24.42■■□□□ 1.5
CPNE1-219ENST00000440240 TMEM265A0A087WTH1 108 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 LOC102724159A0A0B4J2E5 919 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 SMPD1P17405 629 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 HAND2P61296 217 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 PPIGQ13427 754 aaKnown RBP eCLIP24.41■■□□□ 1.51e-11■■□□□ 11.5
CPNE1-219ENST00000440240 PWP2Q15269 919 aaKnown RBP24.41■■□□□ 1.5
CPNE1-219ENST00000440240 B4GALNT3Q6L9W6 998 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 TAPT1Q6NXT6 567 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 CXCL17Q6UXB2 119 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 EEPD1Q7L9B9 569 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 MORC4Q8TE76 937 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 GPCPD1Q9NPB8 672 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 PDGFCQ9NRA1 345 aa24.41■■□□□ 1.5
CPNE1-219ENST00000440240 PDHBP11177 359 aa24.4■■□□□ 1.5
CPNE1-219ENST00000440240 SDSP20132 328 aa24.4■■□□□ 1.5
CPNE1-219ENST00000440240 NT5C2P49902 561 aa24.4■■□□□ 1.5
CPNE1-219ENST00000440240 BAATQ14032 418 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-219ENST00000440240 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
CPNE1-219ENST00000440240 TTYH1Q9H313 450 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-219ENST00000440240 OSBPL3Q9H4L5 887 aa24.4■■□□□ 1.5
CPNE1-219ENST00000440240 FRMPD2Q68DX3 1309 aaPredicted RBP24.39■■□□□ 1.5
CPNE1-219ENST00000440240 KIAA1211Q6ZU35 1233 aa24.39■■□□□ 1.49
CPNE1-219ENST00000440240 SLC43A3Q8NBI5 491 aa24.39■■□□□ 1.49
CPNE1-219ENST00000440240 ESR2Q92731 530 aa24.39■■□□□ 1.49
CPNE1-219ENST00000440240 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.39■■□□□ 1.497e-13■■■■■ 34.6
CPNE1-219ENST00000440240 ZNF213O14771 459 aa24.38■■□□□ 1.49
CPNE1-219ENST00000440240 CD4P01730 458 aa24.38■■□□□ 1.49
CPNE1-219ENST00000440240 ZNF543Q08ER8 600 aa24.38■■□□□ 1.49
CPNE1-219ENST00000440240 ITGA7Q13683 1181 aa24.38■■□□□ 1.49
CPNE1-219ENST00000440240 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.38■■□□□ 1.49
CPNE1-219ENST00000440240 FBXO16Q8IX29 292 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-219ENST00000440240 PURBQ96QR8 312 aaKnown RBP24.38■■□□□ 1.49
CPNE1-219ENST00000440240 DDX49Q9Y6V7 483 aaKnown RBP24.38■■□□□ 1.49
CPNE1-219ENST00000440240 UNC80Q8N2C7 3258 aa24.38■■□□□ 1.49
CPNE1-219ENST00000440240 PTPDC1A2A3K4 754 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 NFIBO00712 420 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 SNHG28P0DPA3 235 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 ALDH5A1P51649 535 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-219ENST00000440240 NUCB1Q02818 461 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 CCDC178Q5BJE1 867 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 DGKHQ86XP1 1220 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 PLEKHM2Q8IWE5 1019 aa24.37■■□□□ 1.49
CPNE1-219ENST00000440240 MPHOSPH6Q99547 160 aaKnown RBP24.37■■□□□ 1.49
CPNE1-219ENST00000440240 CSF2RAP15509 400 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 DUSP28Q4G0W2 176 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 TMEM240Q5SV17 173 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms