RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SPZ1Q9BXG8 430 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 UNC93B1Q9H1C4 597 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 HMX1Q9NP08 348 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-206ENST00000439717 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
HSPG2-206ENST00000439717 RBM28Q9NW13 759 aaKnown RBP13.73□□□□□ -0.21
HSPG2-206ENST00000439717 CYP46A1Q9Y6A2 500 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 CENPFP49454 3210 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 ZBTB43O43298 467 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 CYTH3O43739 400 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 MYCP01106 439 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-206ENST00000439717 GJB1P08034 283 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
HSPG2-206ENST00000439717 SOX10P56693 466 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-206ENST00000439717 TRIM32Q13049 653 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 MICU3Q86XE3 530 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 FAM133AQ8N9E0 248 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 RGS22Q8NE09 1264 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 CLEC4DQ8WXI8 215 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 PAK6Q9NQU5 681 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-206ENST00000439717 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 NRBP1Q9UHY1 535 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 BRPF3Q9ULD4 1205 aa13.72□□□□□ -0.21
HSPG2-206ENST00000439717 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
HSPG2-206ENST00000439717 PNMA6FA0A0J9YX94 578 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 SEC24BO95487 1268 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 RXRAP19793 462 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 CYP2C19P33261 490 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 SLC35G1Q2M3R5 365 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 USH1GQ495M9 461 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 NSMFQ6X4W1 530 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 BRF1Q92994 677 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 PIGSQ96S52 555 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
HSPG2-206ENST00000439717 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.21
HSPG2-206ENST00000439717 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.22
HSPG2-206ENST00000439717 ZNFX1Q9P2E3 1918 aaKnown RBP13.7□□□□□ -0.22
HSPG2-206ENST00000439717 SYNGAP1Q96PV0 1343 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 NFIBO00712 420 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 TAL1P17542 331 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-206ENST00000439717 GJA8P48165 433 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 RGS19P49795 217 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 EVCP57679 992 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 APOBRQ0VD83 1088 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 RTN1Q16799 776 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 RNF207Q6ZRF8 634 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 CCDC144CPQ8IYA2 1237 aa13.7□□□□□ -0.22
HSPG2-206ENST00000439717 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
HSPG2-206ENST00000439717 RRP36Q96EU6 259 aaKnown RBP13.7□□□□□ -0.22
HSPG2-206ENST00000439717 LOC102724159A0A0B4J2E5 919 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 SGPL1O95470 568 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 CYBAP13498 195 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 CNTN2Q02246 1040 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 PWP2Q15269 919 aaKnown RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 RAB11FIP4Q86YS3 637 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 FGD4Q96M96 766 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 ADD3Q9UEY8 706 aaKnown RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 SEC63Q9UGP8 760 aaKnown RBP13.69□□□□□ -0.22
HSPG2-206ENST00000439717 PCDHA1Q9Y5I3 950 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 NID2Q14112 1375 aa13.69□□□□□ -0.22
HSPG2-206ENST00000439717 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 ASB14A6NK59 587 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 MSCO60682 206 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 CCND3P30281 292 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-206ENST00000439717 RPS6P62753 249 aaKnown RBP13.68□□□□□ -0.22
HSPG2-206ENST00000439717 GHRHRQ02643 423 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 TOB2Q14106 344 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-206ENST00000439717 U2AF1L4Q8WU68 220 aaKnown RBP13.68□□□□□ -0.22
HSPG2-206ENST00000439717 DEFB118Q96PH6 123 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 CRISPLD2Q9H0B8 497 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-206ENST00000439717 CNPY2Q9Y2B0 182 aa13.68□□□□□ -0.22
HSPG2-206ENST00000439717 SEPT4O43236 478 aa13.67□□□□□ -0.22
HSPG2-206ENST00000439717 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-206ENST00000439717 CALML3P27482 149 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms