RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 EFCAB13Q8IY85 973 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 OR2W6PQ8NHA6 318 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC113Q9H0I3 377 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 RWDD2AQ9UIY3 292 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 NFU1Q9UMS0 254 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 CSF1RP07333 972 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 GYG1P46976 350 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 AARSP49588 968 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 CARSP49589 748 aaKnown RBP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 SMIM5Q71RC9 77 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 CREG2Q8IUH2 290 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 KRT23Q9C075 422 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 RBM12Q9NTZ6 932 aaKnown RBP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 CDK5RAP2Q96SN8 1893 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 SHTN1A0MZ66 631 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 INPP5BP32019 993 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 KIF6Q6ZMV9 814 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 MMS22LQ6ZRQ5 1243 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 HAUS4Q9H6D7 363 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 NHSQ6T4R5 1651 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 CACNA1SQ13698 1873 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 STK36Q9NRP7 1315 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
SCAF4-203ENST00000434667 CSGALNACT2Q8N6G5 542 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 ZIM3Q96PE6 472 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 HLTFQ14527 1009 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCAF4-203ENST00000434667 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
SCAF4-203ENST00000434667 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 KRT86O43790 486 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 GLI1P08151 1106 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 FUT2Q10981 343 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 STK4Q13043 487 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 SPRED3Q2MJR0 410 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 ZNF658Q5TYW1 1059 aaPredicted RBP11.66□□□□□ -0.54
SCAF4-203ENST00000434667 PAPD7Q5XG87 772 aaKnown RBP11.66□□□□□ -0.54
SCAF4-203ENST00000434667 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 SPATA4Q8NEY3 305 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC43Q96MW1 224 aaKnown RBP11.66□□□□□ -0.54
SCAF4-203ENST00000434667 MMRN2Q9H8L6 949 aa11.66□□□□□ -0.54
SCAF4-203ENST00000434667 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 FTCDO95954 541 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 RASSF7Q02833 373 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 SEC23AQ15436 765 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC51Q96ER9 411 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 SLC39A2Q9NP94 309 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 TAF1LQ8IZX4 1826 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 FOCADQ5VW36 1801 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 LRRC10BA6NIK2 292 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 INF2Q27J81 1249 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC42Q96M95 316 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 PPANQ9NQ55 473 aaKnown RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 KIF5AQ12840 1032 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 MCTP2Q6DN12 878 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 CTCFLQ8NI51 663 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 ZSCAN10Q96SZ4 725 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-203ENST00000434667 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
SCAF4-203ENST00000434667 ITIH6Q6UXX5 1313 aa11.65□□□□□ -0.55
SCAF4-203ENST00000434667 LY75O60449 1722 aa11.65□□□□□ -0.55
SCAF4-203ENST00000434667 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 GOLGA8HP0CJ92 632 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 FECHP22830 423 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 EIF4A3P38919 411 aaKnown RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 NNTQ13423 1086 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 LRRC41Q15345 812 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 MAATS1Q7Z4T9 603 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 GJA10Q969M2 543 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 CNOT6LQ96LI5 555 aaKnown RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 DUSP9Q99956 384 aaKnown RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 LRRC4CQ9HCJ2 640 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 ARHGAP20Q9P2F6 1191 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 SMIM23A6NLE4 172 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 USP17L21D6R901 530 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 GUCY2DQ02846 1103 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 NCAPGQ9BPX3 1015 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms