RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ZSWIM5Q9P217 1185 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 KDM3BQ7LBC6 1761 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 A0A1B0GUA9 196 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 CDKL5O76039 1030 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 HEXIM1O94992 359 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 PAK1Q13153 545 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 IRF2BP1Q8IU81 584 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 KLHL7Q8IXQ5 586 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 TRIML1Q8N9V2 468 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 MDM1Q8TC05 714 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 MAGEC3Q8TD91 643 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 MICAL1Q8TDZ2 1067 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 TATDN2Q93075 761 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 OSBPL9Q96SU4 736 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 HLTFQ14527 1009 aaKnown RBP eCLIP12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 FAM167BQ9BTA0 163 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 ZCWPW1Q9H0M4 648 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 XDHP47989 1333 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 LGR5O75473 907 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 KIF4AO95239 1232 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 SCTRP47872 440 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 ICA1Q05084 483 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 MB21D1Q8N884 522 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 SHISA4Q96DD7 197 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 KRT12Q99456 494 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 SOS2Q07890 1332 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 A6NNZ2 444 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 FAM107AO95990 144 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 VAV2P52735 878 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 TBC1D1Q86TI0 1168 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-202ENST00000424880 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.4
SEC61A1-202ENST00000424880 ANKRD20A8PQ5CZ79 823 aa12.52□□□□□ -0.4
SEC61A1-202ENST00000424880 FAM207AQ9NSI2 230 aaPredicted RBP12.52□□□□□ -0.4
SEC61A1-202ENST00000424880 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.4
SEC61A1-202ENST00000424880 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.4
SEC61A1-202ENST00000424880 CYP27B1O15528 508 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 PHKG2P15735 406 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 SSR1P43307 286 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 ADCY2Q08462 1091 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 TLDC1Q6P9B6 456 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 CCDC42Q96M95 316 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 GOLPH3Q9H4A6 298 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 LIMA1Q9UHB6 759 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 FTCDO95954 541 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 FECHP22830 423 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 KRT83P78385 493 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 KDM7AQ6ZMT4 941 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 IQCKQ8N0W5 287 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 LMBR1Q8WVP7 490 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
SEC61A1-202ENST00000424880 ADAMTS3O15072 1205 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 KANK3Q6NY19 840 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 SEC16BQ96JE7 1060 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 CNOT8Q9UFF9 292 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 CPDO75976 1380 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 EPHB6O15197 1021 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 MCM7P33993 719 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 RASSF7Q02833 373 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 CPLX4Q7Z7G2 160 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 PRCCQ92733 491 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 TRIM47Q96LD4 638 aa12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-202ENST00000424880 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-202ENST00000424880 PTGDRQ13258 359 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms