RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NAT16Q8N8M0 369 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 CXorf38Q8TB03 319 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 SEC16BQ96JE7 1060 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 TM9SF2Q99805 663 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 SRRTQ9BXP5 876 aaKnown RBP6.97□□□□□ -1.29
CLK1-203ENST00000409769 ACBD3Q9H3P7 528 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 AP5S1Q9NUS5 200 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 SDHBP21912 280 aa6.96□□□□□ -1.3
CLK1-203ENST00000409769 MAPKAPK2P49137 400 aa6.96□□□□□ -1.3
CLK1-203ENST00000409769 PANK1Q8TE04 598 aa6.96□□□□□ -1.3
CLK1-203ENST00000409769 IMPACTQ9P2X3 320 aa6.96□□□□□ -1.3
CLK1-203ENST00000409769 SMARCA2P51531 1590 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 CC2D2AQ9P2K1 1620 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 PFKLP17858 780 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 CORO7P57737 925 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 RTP2Q5QGT7 225 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 ZC3H14Q6PJT7 736 aaKnown RBP6.95□□□□□ -1.3
CLK1-203ENST00000409769 IGDCC3Q8IVU1 814 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 TMEFF1Q8IYR6 380 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 XYLT2Q9H1B5 865 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 EPB41L4AQ9HCS5 686 aaPredicted RBP6.95□□□□□ -1.3
CLK1-203ENST00000409769 LUC7LQ9NQ29 371 aaKnown RBP6.95□□□□□ -1.3
CLK1-203ENST00000409769 GINM1Q9NU53 330 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 PCDHA5Q9Y5H7 936 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 ATAD2BQ9ULI0 1458 aa6.95□□□□□ -1.3
CLK1-203ENST00000409769 SRGAP3O43295 1099 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 GSTM1P09488 218 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 TARBP2Q15633 366 aaKnown RBP6.94□□□□□ -1.3
CLK1-203ENST00000409769 NOL9Q5SY16 702 aaKnown RBP6.94□□□□□ -1.3
CLK1-203ENST00000409769 RPTNQ6XPR3 784 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 JAMLQ86YT9 394 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 SLC43A3Q8NBI5 491 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 FERD3LQ96RJ6 166 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 JMJD8Q96S16 334 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 SLC12A9Q9BXP2 914 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 FHOD1Q9Y613 1164 aa6.94□□□□□ -1.3
CLK1-203ENST00000409769 C9IYK1 514 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 SHOXO15266 292 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 BUB1BO60566 1050 aaPredicted RBP6.93□□□□□ -1.3
CLK1-203ENST00000409769 CYBBP04839 570 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 CEBPAP49715 358 aaPredicted RBP6.93□□□□□ -1.3
CLK1-203ENST00000409769 KIR3DS1Q14943 382 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 PLEKHN1Q494U1 663 aaPredicted RBP6.93□□□□□ -1.3
CLK1-203ENST00000409769 TMEM52Q8NDY8 209 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 STRIP2Q9ULQ0 834 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 SF3B6Q9Y3B4 125 aaKnown RBP6.93□□□□□ -1.3
CLK1-203ENST00000409769 IRS2Q9Y4H2 1338 aa6.93□□□□□ -1.3
CLK1-203ENST00000409769 NCAPD3P42695 1498 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 TOP2AP11388 1531 aaKnown RBP6.92□□□□□ -1.3
CLK1-203ENST00000409769 HMGXB3Q12766 1538 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 A0A087WZG4 1122 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 A0A1W2PQJ5 194 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 FGF10O15520 208 aaPredicted RBP6.92□□□□□ -1.3
CLK1-203ENST00000409769 TBC1D8O95759 1140 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 ACRP10323 421 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 MVKQ03426 396 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 PAQR3Q6TCH7 311 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 PWWP2AQ96N64 755 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 TINF2Q9BSI4 451 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
CLK1-203ENST00000409769 ZC3H12DA2A288 527 aaKnown RBP6.91□□□□□ -1.3
CLK1-203ENST00000409769 OTOL1A6NHN0 477 aaPredicted RBP6.91□□□□□ -1.3
CLK1-203ENST00000409769 ITGA4P13612 1032 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
CLK1-203ENST00000409769 GUCY2CP25092 1073 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 GIPRP48546 466 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 POU4F1Q01851 419 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 GNL2Q13823 731 aaKnown RBP6.91□□□□□ -1.3
CLK1-203ENST00000409769 NLGN2Q8NFZ4 835 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 TEPSINQ96N21 525 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 PDLIM7Q9NR12 457 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 SLC12A7Q9Y666 1083 aa6.91□□□□□ -1.3
CLK1-203ENST00000409769 H0Y8X5 98 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 CD247P20963 164 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 IGFBP6P24592 240 aaPredicted RBP6.9□□□□□ -1.3
CLK1-203ENST00000409769 ZNF445P59923 1031 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 TCEAL1Q15170 157 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
CLK1-203ENST00000409769 GMLQ99445 158 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 PPT2Q9UMR5 302 aa6.9□□□□□ -1.3
CLK1-203ENST00000409769 CELA3BP08861 270 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 DBHP09172 617 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 NASPP49321 788 aaPredicted RBP6.89□□□□□ -1.31
CLK1-203ENST00000409769 TDRD10Q5VZ19 366 aaKnown RBP6.89□□□□□ -1.31
CLK1-203ENST00000409769 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 FRMD5Q7Z6J6 570 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 LSRQ86X29 649 aaPredicted RBP6.89□□□□□ -1.31
CLK1-203ENST00000409769 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 SHDQ96IW2 340 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 CAPN10Q9HC96 672 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms