RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 CYP39A1Q9NYL5 469 aa17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 ZMYND8Q9ULU4 1186 aaPredicted RBP17.04■□□□□ 0.32
NIF3L1-205ENST00000409588 PLXNA1Q9UIW2 1896 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 B4DLN1 442 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 CHMLP26374 656 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 NKX3-2P78367 333 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 ANO1Q5XXA6 986 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 GPCPD1Q9NPB8 672 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 ZHX1Q9UKY1 873 aaPredicted RBP17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
NIF3L1-205ENST00000409588 NEDD4P46934 1319 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 CST5P28325 142 aaPredicted RBP17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 SLC16A2P36021 539 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 ATN1P54259 1190 aaPredicted RBP17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 RTP1P59025 263 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 ASPRV1Q53RT3 343 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 IQSEC1Q6DN90 963 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 TTBK2Q6IQ55 1244 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 GPR153Q6NV75 609 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 KLHDC9Q8NEP7 349 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 TOX2Q96NM4 488 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 SEZ6LQ9BYH1 1024 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 Q9Y3F1 56 aa17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 RANBP2P49792 3224 aaKnown RBP17.02■□□□□ 0.32
NIF3L1-205ENST00000409588 DNAH12Q6ZR08 3092 aa17.02■□□□□ 0.31
NIF3L1-205ENST00000409588 ELP1O95163 1332 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 FRMPD3Q5JV73 1810 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 B4E1Z4 1266 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 PGK1P00558 417 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 SYN1P17600 705 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 GJA9P57773 515 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 CNTN2Q02246 1040 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 CHMP4CQ96CF2 233 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 FGD4Q96M96 766 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 UBE2OQ9C0C9 1292 aaKnown RBP17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 UPF3AQ9H1J1 476 aaKnown RBP17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 PLSCR2Q9NRY7 297 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 METRNQ9UJH8 293 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
NIF3L1-205ENST00000409588 FRMPD2Q68DX3 1309 aaPredicted RBP17■□□□□ 0.31
NIF3L1-205ENST00000409588 ALPK3Q96L96 1907 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 SOWAHBA6NEL2 793 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 ACLYP53396 1101 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 TNFAIP2Q03169 654 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 TRAF1Q13077 416 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 LRIT3Q3SXY7 679 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 CCSAPQ6IQ19 270 aaPredicted RBP17■□□□□ 0.31
NIF3L1-205ENST00000409588 NSMFQ6X4W1 530 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 TDHQ8IZJ6 230 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
NIF3L1-205ENST00000409588 DNERQ8NFT8 737 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 GLT1D1Q96MS3 346 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 KATNBL1Q9H079 304 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 VTA1Q9NP79 307 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 ATP11BQ9Y2G3 1177 aa17■□□□□ 0.31
NIF3L1-205ENST00000409588 TNKSO95271 1327 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 MROH7Q68CQ1 1323 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 SGSM2O43147 1006 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 PARP1P09874 1014 aaKnown RBP16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 KCNA10Q16322 511 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 IFIT1BQ5T764 474 aaKnown RBP16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 RNF207Q6ZRF8 634 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 MAP4K1Q92918 833 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 FERMT2Q96AC1 680 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 TRIOBPQ9H2D6 2365 aa16.99■□□□□ 0.31
NIF3L1-205ENST00000409588 A0A1W2PQ45 241 aaPredicted RBP16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 A0A1W2PQY0 241 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 ERICH2A1L162 156 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 ZEB2O60315 1214 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 CABYRO75952 493 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 SNAP25P60880 206 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 BAATQ14032 418 aaPredicted RBP16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 GNASQ5JWF2 1037 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 MCF2L2Q86YR7 1114 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 NCOA7Q8NI08 942 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 MTA3Q9BTC8 594 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 STARD7Q9NQZ5 370 aa16.98■□□□□ 0.31
NIF3L1-205ENST00000409588 PTPDC1A2A3K4 754 aa16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 DCDC2CA8MYV0 355 aa16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 TRIM60Q495X7 471 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 565.5 ms