RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KIF3AQ9Y496 699 aa19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 CTDP1Q9Y5B0 961 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 PTPDC1A2A3K4 754 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 VWA5AO00534 786 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 PRPF3O43395 683 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 CYTH3O43739 400 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 SHCBP1Q8NEM2 672 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 SOCS4Q8WXH5 440 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 WASF1Q92558 559 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 PHKBQ93100 1093 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 SLC26A6Q9BXS9 759 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 MOV10L1Q9BXT6 1211 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 CPVLQ9H3G5 476 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 JMJD4Q9H9V9 463 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 VAT1LQ9HCJ6 419 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 BIN2Q9UBW5 565 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
TSPAN4-208ENST00000409531 ZBTB5O15062 677 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 ZBED4O75132 1171 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 CTDNEP1O95476 244 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 PTPREP23469 700 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 TRAF1Q13077 416 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 PLS1Q14651 629 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 TMEM132BQ14DG7 1078 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 MORN1Q5T089 497 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 WDR78Q5VTH9 848 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 SMARCC2Q8TAQ2 1214 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 MTMR8Q96EF0 704 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 TMEM106CQ9BVX2 250 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 SMC3Q9UQE7 1217 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 V9GY48 417 aaPredicted RBP19.08■□□□□ 0.65
TSPAN4-208ENST00000409531 A0A0G2JMZ2 1700 aa19.08■□□□□ 0.64
TSPAN4-208ENST00000409531 PNMA6FA0A0J9YX94 578 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 STRNO43815 780 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 DEXIO95424 95 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 XRCC5P13010 732 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 ELNP15502 786 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 CYP2B6P20813 491 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 UBXN2AP68543 259 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 CDC37Q16543 378 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 HOMER1Q86YM7 354 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 USP6NLQ92738 828 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 RANBP17Q9H2T7 1088 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 MROH8Q9H579 483 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 SLC38A10Q9HBR0 1119 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 ORC3Q9UBD5 711 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 CENPFP49454 3210 aa19.07■□□□□ 0.64
TSPAN4-208ENST00000409531 SLC15A5A6NIM6 579 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 hCG_1984214I3L0E3 225 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 SLC25A27O95847 323 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 MYCP01106 439 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 ERCC3P19447 782 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 STAT3P40763 770 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 OAZ1P54368 228 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 SLC35G1Q2M3R5 365 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 ZNF713Q8N859 430 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 FAM184AQ8NB25 1140 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 REPS2Q8NFH8 660 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 PIGSQ96S52 555 aa19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-208ENST00000409531 JAK2O60674 1132 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 RGS2P41220 211 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 MAP2K5Q13163 448 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 MTFR1Q15390 333 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 PFKFB3Q16875 520 aaPredicted RBP19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 QRICH1Q2TAL8 776 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 PRPF38BQ5VTL8 546 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 NCAPG2Q86XI2 1143 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 RIOX2Q8IUF8 465 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 PIBF1Q8WXW3 757 aa19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-208ENST00000409531 SCG2P13521 617 aa19.04■□□□□ 0.64
TSPAN4-208ENST00000409531 XBP1P17861 261 aa19.04■□□□□ 0.64
TSPAN4-208ENST00000409531 FBXO11Q86XK2 927 aa19.04■□□□□ 0.64
TSPAN4-208ENST00000409531 TRMT44Q8IYL2 757 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-208ENST00000409531 DDX11Q96FC9 970 aa19.04■□□□□ 0.64
TSPAN4-208ENST00000409531 AMNQ9BXJ7 453 aa19.04■□□□□ 0.64
TSPAN4-208ENST00000409531 POTEFA5A3E0 1075 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 PPFIA3O75145 1194 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 INHAP05111 366 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 ICAM1P05362 532 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 GJB2P29033 226 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 COPB2P35606 906 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 GRB14Q14449 540 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 CCDC174Q6PII3 467 aa19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 FAM177A1Q8N128 213 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 CCDC12Q8WUD4 166 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-208ENST00000409531 SMCHD1A6NHR9 2005 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 hCG_1642624A0A1W2PR95 340 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 HMGCRP04035 888 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 HOXC6P09630 235 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 CCL5P13501 91 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 FDPSP14324 419 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 PDCP20941 246 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 PKN1Q16512 942 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 HEATR3Q7Z4Q2 680 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 ABRAQ8N0Z2 381 aa19.02■□□□□ 0.64
TSPAN4-208ENST00000409531 CPXCR1Q8N123 301 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms