RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 RRP1BQ14684 758 aaKnown RBP10.3□□□□□ -0.76
GPN1-202ENST00000407583 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 ADSSL1Q8N142 457 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 RNF214Q8ND24 703 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 PI4K2BQ8TCG2 481 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
GPN1-202ENST00000407583 EDAQ92838 391 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 ZSWIM6Q9HCJ5 1215 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 TMOD4Q9NZQ9 345 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
GPN1-202ENST00000407583 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
GPN1-202ENST00000407583 CDC25BP30305 580 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 BACE1P56817 501 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 CCNA1P78396 465 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 KRT32Q14532 448 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
GPN1-202ENST00000407583 TRIM67Q6ZTA4 783 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 DPP9Q86TI2 863 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 CREBRFQ8IUR6 639 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 ADHFE1Q8IWW8 467 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 CLASRPQ8N2M8 674 aaKnown RBP10.29□□□□□ -0.76
GPN1-202ENST00000407583 FBXL6Q8N531 539 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 KIAA1524Q8TCG1 905 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 EVI5LQ96CN4 794 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 IDI2Q9BXS1 227 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 UPF3BQ9BZI7 483 aaKnown RBP10.29□□□□□ -0.76
GPN1-202ENST00000407583 USP44Q9H0E7 712 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
GPN1-202ENST00000407583 DDX4Q9NQI0 724 aaKnown RBP10.29□□□□□ -0.76
GPN1-202ENST00000407583 PRKAG3Q9UGI9 489 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 PAXBP1Q9Y5B6 917 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 USP24Q9UPU5 2620 aa10.29□□□□□ -0.76
GPN1-202ENST00000407583 PNMA6EA0A0J9YXQ4 647 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 KIF2AO00139 706 aaPredicted RBP10.28□□□□□ -0.76
GPN1-202ENST00000407583 CTAGE5O15320 804 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 TUBB4AP04350 444 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 ADORA2AP29274 412 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 CDK7P50613 346 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 AK2P54819 239 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 NEXNQ0ZGT2 675 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 ATL3Q6DD88 541 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 KSR2Q6VAB6 950 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 NEK9Q8TD19 979 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 NUP133Q8WUM0 1156 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 AS3MTQ9HBK9 375 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 RABGAP1Q9Y3P9 1069 aa10.28□□□□□ -0.76
GPN1-202ENST00000407583 MAP1BP46821 2468 aaKnown RBP10.28□□□□□ -0.76
GPN1-202ENST00000407583 CTIFO43310 598 aaKnown RBP10.27□□□□□ -0.76
GPN1-202ENST00000407583 SURF6O75683 361 aaKnown RBP10.27□□□□□ -0.76
GPN1-202ENST00000407583 NBL1P41271 181 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 CCL23P55773 120 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 RBM10P98175 930 aaKnown RBP10.27□□□□□ -0.76
GPN1-202ENST00000407583 DMTNQ08495 405 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 PICALMQ13492 652 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 RBM43Q6ZSC3 357 aaKnown RBP10.27□□□□□ -0.76
GPN1-202ENST00000407583 RUFY3Q7L099 469 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 RNF135Q8IUD6 432 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 FAM126BQ8IXS8 530 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 NUP62CLQ9H1M0 184 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 ECHDC1Q9NTX5 307 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 LMCD1Q9NZU5 365 aa10.27□□□□□ -0.76
GPN1-202ENST00000407583 ZNF292O60281 2723 aa10.27□□□□□ -0.77
GPN1-202ENST00000407583 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
GPN1-202ENST00000407583 ASPMQ8IZT6 3477 aa10.27□□□□□ -0.77
GPN1-202ENST00000407583 GOLGA6L4A6NEF3 574 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 SMTNL1A8MU46 457 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 TBC1D12O60347 775 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 COBLO75128 1261 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 GADD45BO75293 160 aaPredicted RBP10.26□□□□□ -0.77
GPN1-202ENST00000407583 PRDX5P30044 214 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 CAP2P40123 477 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
GPN1-202ENST00000407583 FOXO4P98177 505 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 TTLL4Q14679 1199 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 TAF7LQ5H9L4 462 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 DNAAF4Q8WXU2 420 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 TSEN34Q9BSV6 310 aaKnown RBP10.26□□□□□ -0.77
GPN1-202ENST00000407583 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 BTBD7Q9P203 1132 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 CNPY2Q9Y2B0 182 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 ATAD5Q96QE3 1844 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 SRGAP3O43295 1099 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
GPN1-202ENST00000407583 GJB2P29033 226 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 AVPR2P30518 371 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 KCNA10Q16322 511 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 CAVIN4Q5BKX8 364 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 ANKRD7Q92527 254 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 PUS3Q9BZE2 481 aaKnown RBP10.26□□□□□ -0.77
GPN1-202ENST00000407583 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 HIPK3Q9H422 1215 aa10.26□□□□□ -0.77
GPN1-202ENST00000407583 ZSCAN16Q9H4T2 348 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms