RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CAVIN3Q969G5 261 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 PNKPQ96T60 521 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 GNA14O95837 355 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD35Q8N283 1001 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 USHBP1Q8N6Y0 703 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 PPP1R14CQ8TAE6 165 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 GORASP1Q9BQQ3 440 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 THAP9Q9H5L6 903 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 TXNDC9O14530 226 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 ZMYND10O75800 440 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 PDHA1P08559 390 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 ATP1A3P13637 1013 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 HSPA9P38646 679 aaKnown RBP10.92□□□□□ -0.66
PTPRM-203ENST00000400060 GUCY1A3Q02108 690 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 WTAPQ15007 396 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 NECTIN1Q15223 517 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 PEX26Q7Z412 305 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 GOLPH3LQ9H4A5 285 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
PTPRM-203ENST00000400060 PGRMC1O00264 195 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 SHOX2O60902 331 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 INAQ16352 499 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 MPRIPQ6WCQ1 1025 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 DZIP3Q86Y13 1208 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 PAG1Q9NWQ8 432 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 ARL2BPQ9Y2Y0 163 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 PI4KAP2A4QPH2 592 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 LARGE1O95461 756 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 MAN1A1P33908 653 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 ESRRGP62508 458 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 ASIC1P78348 528 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 PI4KAP1Q8N8J0 262 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 NAF1Q96HR8 494 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 AMFRQ9UKV5 643 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 NVLO15381 856 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 GOLGA8FQ08AF8 430 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 GOLGA8DPQ0D2H9 430 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 SLC4A8Q2Y0W8 1093 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 TRIM65Q6PJ69 517 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 TRPM8Q7Z2W7 1104 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 GRK7Q8WTQ7 553 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 CATSPER2Q96P56 530 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 ELAC2Q9BQ52 826 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 CCDC28BQ9BUN5 200 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 NFU1Q9UMS0 254 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 ZWINTO95229 277 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 NQO1P15559 274 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 WLSQ5T9L3 541 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 MYLK4Q86YV6 388 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 FUKQ8N0W3 1084 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 C17orf50Q8WW18 174 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 HIC2Q96JB3 615 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 PHACTR3Q96KR7 559 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 NUDCD1Q96RS6 583 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 MYD88Q99836 296 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 HAUS8Q9BT25 410 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
PTPRM-203ENST00000400060 FLT4P35916 1363 aa10.91□□□□□ -0.66
PTPRM-203ENST00000400060 I3L4J1 428 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 KCNA3P22001 575 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 CUL4BQ13620 913 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 BYSLQ13895 437 aaKnown RBP10.9□□□□□ -0.66
PTPRM-203ENST00000400060 PDE1CQ14123 709 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ENAHQ8N8S7 591 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ABCA8O94911 1581 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 O00370 1275 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 E2F6O75461 281 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ESRRBO95718 433 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 PHBP35232 272 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 VHLP40337 213 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 PCYT1AP49585 367 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 NR1H3Q13133 447 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 MFSD6Q6ZSS7 791 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 UTP6Q9NYH9 597 aaKnown RBP10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ZMYM6O95789 1325 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 A0A1B0GTH6 734 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 HDLBPQ00341 1268 aaKnown RBP10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD20A4Q4UJ75 823 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 KLC3Q6P597 504 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 CCDC87Q9NVE4 849 aa10.9□□□□□ -0.66
PTPRM-203ENST00000400060 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.67
PTPRM-203ENST00000400060 FESP07332 822 aa10.9□□□□□ -0.67
PTPRM-203ENST00000400060 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.67
PTPRM-203ENST00000400060 CCDC25Q86WR0 208 aa10.9□□□□□ -0.67
PTPRM-203ENST00000400060 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.67
PTPRM-203ENST00000400060 ANGEL1Q9UNK9 670 aaKnown RBP10.9□□□□□ -0.67
PTPRM-203ENST00000400060 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 A0A1W2PQC6 194 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 KCNK3O14649 394 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 RASGRF2O14827 1237 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 RFC1P35251 1148 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 KCNB1Q14721 858 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 Q4G0T1 1027 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 IRGCQ6NXR0 463 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms