RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ZNF396Q96N95 335 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-204ENST00000397443 RIC8AQ9NPQ8 531 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 HOXC10Q9NYD6 342 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 CCL15-CCL14A0A0B4J2E2 113 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 CCDC194A0A1B0GVG4 234 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 PEX10O60683 326 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 CCL15Q16663 113 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 BICD2Q8TD16 824 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 GOLGA6L22H0YM25 854 aa24.26■■□□□ 1.47
CPNE1-204ENST00000397443 PRPF40AO75400 957 aaKnown RBP24.26■■□□□ 1.47
CPNE1-204ENST00000397443 ALAS1P13196 640 aa24.26■■□□□ 1.47
CPNE1-204ENST00000397443 GTF2A2P52657 109 aa24.26■■□□□ 1.47
CPNE1-204ENST00000397443 PLS1Q14651 629 aa24.26■■□□□ 1.47
CPNE1-204ENST00000397443 MS4A4AQ96JQ5 239 aa24.26■■□□□ 1.47
CPNE1-204ENST00000397443 P2RX7Q99572 595 aaKnown RBP24.26■■□□□ 1.47
CPNE1-204ENST00000397443 ASCC2Q9H1I8 757 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-204ENST00000397443 CLIC4Q9Y696 253 aa24.26■■□□□ 1.47
CPNE1-204ENST00000397443 COL11A1P12107 1806 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-204ENST00000397443 M0R2N6 131 aa24.25■■□□□ 1.47
CPNE1-204ENST00000397443 CETPP11597 493 aa24.25■■□□□ 1.47
CPNE1-204ENST00000397443 HOXA7P31268 230 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-204ENST00000397443 MRPL12P52815 198 aaKnown RBP24.25■■□□□ 1.47
CPNE1-204ENST00000397443 GPAT2Q6NUI2 795 aa24.25■■□□□ 1.47
CPNE1-204ENST00000397443 FAM177A1Q8N128 213 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-204ENST00000397443 SPATA32Q96LK8 384 aa24.25■■□□□ 1.47
CPNE1-204ENST00000397443 CFAP45Q9UL16 551 aa24.25■■□□□ 1.47
CPNE1-204ENST00000397443 OPLAHO14841 1288 aa24.24■■□□□ 1.47
CPNE1-204ENST00000397443 ZBTB48P10074 688 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-204ENST00000397443 HOXA13P31271 388 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-204ENST00000397443 TOB1P50616 345 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-204ENST00000397443 GRM1Q13255 1194 aa24.24■■□□□ 1.47
CPNE1-204ENST00000397443 TMEM132BQ14DG7 1078 aa24.24■■□□□ 1.47
CPNE1-204ENST00000397443 RGMBQ6NW40 437 aa24.24■■□□□ 1.47
CPNE1-204ENST00000397443 RASAL3Q86YV0 1011 aa24.24■■□□□ 1.47
CPNE1-204ENST00000397443 BRI3BPQ8WY22 251 aa24.24■■□□□ 1.47
CPNE1-204ENST00000397443 CFBP00751 764 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 TRAF1Q13077 416 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 INF2Q27J81 1249 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 SNRNP48Q6IEG0 339 aaKnown RBP24.23■■□□□ 1.47
CPNE1-204ENST00000397443 TBC1D5Q92609 795 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 PAGR1Q9BTK6 254 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 MRPL11Q9Y3B7 192 aaKnown RBP24.23■■□□□ 1.47
CPNE1-204ENST00000397443 REPS2Q8NFH8 660 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 ADAMTS5Q9UNA0 930 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 TLL2Q9Y6L7 1015 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 ABCB11O95342 1321 aa24.23■■□□□ 1.47
CPNE1-204ENST00000397443 TMEM88BA6NKF7 163 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 WNT7AO00755 349 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 FDX1P10109 184 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 PABPC4Q13310 644 aaKnown RBP eCLIP24.22■■□□□ 1.474e-7■■■□□ 15.8
CPNE1-204ENST00000397443 SF3A1Q15459 793 aaKnown RBP24.22■■□□□ 1.47
CPNE1-204ENST00000397443 RILPL1Q5EBL4 403 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 PAXIP1Q6ZW49 1069 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-204ENST00000397443 LEO1Q8WVC0 666 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-204ENST00000397443 NOL7Q9UMY1 257 aaKnown RBP24.22■■□□□ 1.47
CPNE1-204ENST00000397443 PCDHB6Q9Y5E3 794 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 DDX11L8A8MPP1 907 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 BTBD19C9JJ37 291 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 MEIS2O14770 477 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 CYP2C8P10632 490 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 OSBPP22059 807 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 HERVK_113P62684 666 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 ANO1Q5XXA6 986 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 POTEEQ6S8J3 1075 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 KRT25Q7Z3Z0 450 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 SCAND2PQ9GZW5 306 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-204ENST00000397443 ZNF214Q9UL59 606 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-204ENST00000397443 RIPK3Q9Y572 518 aa24.22■■□□□ 1.47
CPNE1-204ENST00000397443 MYPNQ86TC9 1320 aa24.21■■□□□ 1.47
CPNE1-204ENST00000397443 NFIBO00712 420 aa24.21■■□□□ 1.47
CPNE1-204ENST00000397443 NONOQ15233 471 aaKnown RBP eCLIP24.21■■□□□ 1.47
CPNE1-204ENST00000397443 MUM1L1Q5H9M0 696 aa24.21■■□□□ 1.47
CPNE1-204ENST00000397443 TRERF1Q96PN7 1200 aa24.21■■□□□ 1.47
CPNE1-204ENST00000397443 PDHXO00330 501 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 STK38Q15208 465 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 FCHSD1Q86WN1 690 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 TBCKQ8TEA7 893 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 BTBD7Q9P203 1132 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 CLK2P49760 499 aaKnown RBP24.2■■□□□ 1.46
CPNE1-204ENST00000397443 ZNF174Q15697 407 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 ATL3Q6DD88 541 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 FAM43AQ8N2R8 423 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 TEX13BQ9BXU2 312 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 GLT8D2Q9H1C3 349 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 LMBRD1Q9NUN5 540 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 RTEL1Q9NZ71 1219 aa24.2■■□□□ 1.46
CPNE1-204ENST00000397443 GADD45BO75293 160 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-204ENST00000397443 STAT3P40763 770 aa24.19■■□□□ 1.46
CPNE1-204ENST00000397443 TTC38Q5R3I4 469 aa24.19■■□□□ 1.46
CPNE1-204ENST00000397443 LBX2Q6XYB7 198 aa24.19■■□□□ 1.46
CPNE1-204ENST00000397443 CLEC4DQ8WXI8 215 aa24.19■■□□□ 1.46
CPNE1-204ENST00000397443 RNF146Q9NTX7 359 aa24.19■■□□□ 1.46
CPNE1-204ENST00000397443 POLR3EQ9NVU0 708 aa24.19■■□□□ 1.46
CPNE1-204ENST00000397443 GCOM1H8Y6P7 765 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-204ENST00000397443 POLR2MP0CAP2 368 aa24.18■■□□□ 1.46
CPNE1-204ENST00000397443 MCM7P33993 719 aa24.18■■□□□ 1.46
CPNE1-204ENST00000397443 FSTL1Q12841 308 aa24.18■■□□□ 1.46
CPNE1-204ENST00000397443 SMCR8Q8TEV9 937 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-204ENST00000397443 PTPN18Q99952 460 aa24.18■■□□□ 1.46
CPNE1-204ENST00000397443 MARCKSP29966 332 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms