RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 HAND2P61296 217 aa20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 C1orf53Q5VUE5 145 aa20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 SLC17A8Q8NDX2 589 aa20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 KRT23Q9C075 422 aa20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 MTMR10Q9NXD2 777 aa20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 ZSCAN22P10073 491 aaPredicted RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 RARBP10826 455 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 TAL1P17542 331 aaPredicted RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 TRIM60Q495X7 471 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 STAG1Q8WVM7 1258 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 GTF3C6Q969F1 213 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 XPNPEP3Q9NQH7 507 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 PHF24Q9UPV7 400 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 UNC80Q8N2C7 3258 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 ATP2A1O14983 1001 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 ZNF865P0CJ78 1059 aaPredicted RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 FGD1P98174 961 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 PRPF38AQ8NAV1 312 aaKnown RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 MKL1Q969V6 931 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 FERMT2Q96AC1 680 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 CEP95Q96GE4 821 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 ZNF287Q9HBT7 754 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 CLIP2Q9UDT6 1046 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 SYNPO2Q9UMS6 1093 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 RIPK3Q9Y572 518 aa20.25■□□□□ 0.83
TNFSF13-205ENST00000396545 MYH4Q9Y623 1939 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 PRDM1O75626 825 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 SLC3A2P08195 630 aaKnown RBP20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 PPARAQ07869 468 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 MB21D2Q8IYB1 491 aaPredicted RBP20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 BRF1Q92994 677 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 MTMR4Q9NYA4 1195 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 STXBP5LQ9Y2K9 1186 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 PLIN4Q96Q06 1357 aa20.24■□□□□ 0.83
TNFSF13-205ENST00000396545 ZNF444Q8N0Y2 327 aaPredicted RBP20.23■□□□□ 0.83
TNFSF13-205ENST00000396545 MSL3Q8N5Y2 521 aaKnown RBP20.23■□□□□ 0.83
TNFSF13-205ENST00000396545 PRDM5Q9NQX1 630 aaPredicted RBP20.23■□□□□ 0.83
TNFSF13-205ENST00000396545 MTMR6Q9Y217 621 aa20.23■□□□□ 0.83
TNFSF13-205ENST00000396545 CNPY2Q9Y2B0 182 aa20.23■□□□□ 0.83
TNFSF13-205ENST00000396545 SYNGAP1Q96PV0 1343 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 DNAJC25-GNG10A0A024R161 153 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 FSD2A1L4K1 749 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 POTEB2H3BUK9 544 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 PFKFB2O60825 505 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 F13A1P00488 732 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 PGK1P00558 417 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 AKR1A1P14550 325 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 EVCP57679 992 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 RNF180Q86T96 592 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 TBC1D10CQ8IV04 446 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 GMCL1P1Q8NEA9 526 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 LENG1Q96BZ8 264 aaPredicted RBP20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 TMEM87BQ96K49 555 aa20.22■□□□□ 0.83
TNFSF13-205ENST00000396545 TTLL1O95922 423 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 FAM109BQ6ICB4 259 aaPredicted RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 MAMDC4Q6UXC1 1216 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 SH3RF1Q7Z6J0 888 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 CHAMP1Q96JM3 812 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 GZF1Q9H116 711 aaPredicted RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 SLC38A10Q9HBR0 1119 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 TRIM43BA6NCK2 446 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 ZBED4O75132 1171 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 ADAMTS4O75173 837 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 PRPF40AO75400 957 aaKnown RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 FGRP09769 529 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 PDCP20941 246 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 TLE2Q04725 743 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 BADQ92934 168 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 TRIM43Q96BQ3 446 aaPredicted RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 ZNF274Q96GC6 653 aaPredicted RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 LLPHQ9BRT6 129 aaKnown RBP20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 LRRC2Q9BYS8 371 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
TNFSF13-205ENST00000396545 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 PRC1O43663 620 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 SNAI1O95863 264 aaPredicted RBP20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 STK3Q13188 491 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 ZNF467Q7Z7K2 595 aaPredicted RBP20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 CPXCR1Q8N123 301 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 NEDD1Q8NHV4 660 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 KIFC2Q96AC6 838 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 DDX11Q96FC9 970 aa20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 RAVER2Q9HCJ3 691 aaKnown RBP20.2■□□□□ 0.82
TNFSF13-205ENST00000396545 EYSQ5T1H1 3165 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 TSPY3P0CV98 308 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 TSPY8P0CW00 308 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 OAZ1P54368 228 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 PDE4BQ07343 736 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms