RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 ADCY7P51828 1080 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 CCNA1P78396 465 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 GRM1Q13255 1194 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 TAF1CQ15572 869 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-202ENST00000396172 USH1GQ495M9 461 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 REPS2Q8NFH8 660 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 CUL5Q93034 780 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 P2RX7Q99572 595 aaKnown RBP11.35□□□□□ -0.59
DDX39B-202ENST00000396172 PHF20Q9BVI0 1012 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 ZMYND12Q9H0C1 365 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
DDX39B-202ENST00000396172 SLC25A27O95847 323 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 KRT2P35908 639 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
DDX39B-202ENST00000396172 SNRNP48Q6IEG0 339 aaKnown RBP11.34□□□□□ -0.59
DDX39B-202ENST00000396172 MCF2L2Q86YR7 1114 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
DDX39B-202ENST00000396172 ZNF214Q9UL59 606 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-202ENST00000396172 ATP6V1DQ9Y5K8 247 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 ZNF536O15090 1300 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 KIAA1217Q5T5P2 1943 aa11.34□□□□□ -0.59
DDX39B-202ENST00000396172 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 HSPA6P17066 643 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 STAT3P40763 770 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 FOSBP53539 338 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 PLS1Q14651 629 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 FAM110CQ1W6H9 321 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 COA7Q96BR5 231 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 PAGR1Q9BTK6 254 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 SPATC1LQ9H0A9 340 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 ZSCAN16Q9H4T2 348 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 RIC8AQ9NPQ8 531 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 DOCK3Q8IZD9 2030 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 SMCO2A6NFE2 343 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 ALAS1P13196 640 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 TMEM132BQ14DG7 1078 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.6
DDX39B-202ENST00000396172 PTPN18Q99952 460 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 ACAD9Q9H845 621 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 MORF4L1Q9UBU8 362 aa11.33□□□□□ -0.6
DDX39B-202ENST00000396172 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 BRD1O95696 1058 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 CYP2C8P10632 490 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 C1QTNF8P60827 252 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 SNAP25P60880 206 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 ERVK-9P63128 1117 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 ERVK-24P63145 666 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 MCTP1Q6DN14 999 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
DDX39B-202ENST00000396172 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 SHCBP1Q8NEM2 672 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 GPRC5AQ8NFJ5 357 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 AGBL1Q96MI9 1066 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 PSTPIP2Q9H939 334 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 EHMT1Q9H9B1 1298 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 RNF146Q9NTX7 359 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 MCM3APO60318 1980 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 PFASO15067 1338 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 ADGRA2Q96PE1 1338 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 FOSP01100 380 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-202ENST00000396172 GUCY1B3Q02153 619 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 AP3B2Q13367 1082 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX39B-202ENST00000396172 TRERF1Q96PN7 1200 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 MROH8Q9H579 483 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 KCNJ14Q9UNX9 436 aa11.32□□□□□ -0.6
DDX39B-202ENST00000396172 PIK3CDO00329 1044 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 CA12O43570 354 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 DTNBO60941 627 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 F13A1P00488 732 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 GHRHRQ02643 423 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 CCAR1Q8IX12 1150 aaKnown RBP11.31□□□□□ -0.6
DDX39B-202ENST00000396172 BTBD7Q9P203 1132 aa11.31□□□□□ -0.6
DDX39B-202ENST00000396172 CCDC194A0A1B0GVG4 234 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
DDX39B-202ENST00000396172 TLR2O60603 784 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 AOC2O75106 756 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 POLR2MP0CAP2 368 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 U2AF2P26368 475 aaKnown RBP eCLIP11.3□□□□□ -0.64e-14■■■■□ 23
DDX39B-202ENST00000396172 VEGFBP49765 207 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
DDX39B-202ENST00000396172 NOSTRINQ8IVI9 506 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 HOMER2Q9NSB8 354 aa11.3□□□□□ -0.6
DDX39B-202ENST00000396172 RBPJLQ9UBG7 517 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms