RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 ANKRD20A12PQ8NF67 263 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 MTMR8Q96EF0 704 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 CCDC51Q96ER9 411 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 MTMR9Q96QG7 549 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 JMJD4Q9H9V9 463 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 ZNF215Q9UL58 517 aaPredicted RBP18.9■□□□□ 0.62
NUP50-202ENST00000396096 COPB1P53618 953 aaKnown RBP18.9■□□□□ 0.62
NUP50-202ENST00000396096 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 C7orf25Q9BPX7 421 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 RIC8AQ9NPQ8 531 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 TMEM260Q9NX78 707 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 EP400Q96L91 3159 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 KCNJ18B7U540 433 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 MFAP3LO75121 409 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
NUP50-202ENST00000396096 FXR2P51116 673 aaKnown RBP eCLIP18.89■□□□□ 0.61
NUP50-202ENST00000396096 RBL2Q08999 1139 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 STIM1Q13586 685 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 KCNJ12Q14500 433 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 STRIP1Q5VSL9 837 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 COA7Q96BR5 231 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 MMTAG2Q9BU76 263 aaKnown RBP18.89■□□□□ 0.61
NUP50-202ENST00000396096 DHX36Q9H2U1 1008 aaKnown RBP18.89■□□□□ 0.61
NUP50-202ENST00000396096 GPCPD1Q9NPB8 672 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.89■□□□□ 0.61
NUP50-202ENST00000396096 SCN9AQ15858 1988 aa18.89■□□□□ 0.61
NUP50-202ENST00000396096 EIF6P56537 245 aaKnown RBP18.88■□□□□ 0.61
NUP50-202ENST00000396096 NFIAQ12857 509 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 CLEC10AQ8IUN9 316 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
NUP50-202ENST00000396096 IDI2Q9BXS1 227 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 TNS1Q9HBL0 1735 aaKnown RBP18.88■□□□□ 0.61
NUP50-202ENST00000396096 EDIL3O43854 480 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 PPP1R2P41236 205 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 CLK2P49760 499 aaKnown RBP18.88■□□□□ 0.61
NUP50-202ENST00000396096 TRIM14Q14142 442 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 COBLL1Q53SF7 1204 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 TOGARAM2Q6ZUX3 1019 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 CNGA4Q8IV77 575 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 NOC3LQ8WTT2 800 aaKnown RBP18.88■□□□□ 0.61
NUP50-202ENST00000396096 DHTKD1Q96HY7 919 aaPredicted RBP18.88■□□□□ 0.61
NUP50-202ENST00000396096 TRIM9Q9C026 710 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 THAP9Q9H5L6 903 aa18.88■□□□□ 0.61
NUP50-202ENST00000396096 SLX4Q8IY92 1834 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 PSMA7O14818 248 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 N4BP3O15049 544 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 EEF1GP26641 437 aaKnown RBP18.87■□□□□ 0.61
NUP50-202ENST00000396096 DACT2Q5SW24 774 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 C2CD5Q86YS7 1000 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.61
NUP50-202ENST00000396096 MKL1Q969V6 931 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 CCDC47Q96A33 483 aaKnown RBP18.87■□□□□ 0.61
NUP50-202ENST00000396096 DBNDD1Q9H9R9 158 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 DNAI1Q9UI46 699 aa18.87■□□□□ 0.61
NUP50-202ENST00000396096 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
NUP50-202ENST00000396096 GYPCP04921 128 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 TECP42680 631 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 AMPD3Q01432 767 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 PDIA5Q14554 519 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 CALCRLQ16602 461 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 PPP4R3AQ6IN85 833 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 CALML4Q96GE6 196 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 PLIN2Q99541 437 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 DNAJC18Q9H819 358 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 CGNQ9P2M7 1197 aaKnown RBP18.86■□□□□ 0.61
NUP50-202ENST00000396096 STK17AQ9UEE5 414 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 ZBTB5O15062 677 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 COBLO75128 1261 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 TPM1P09493 284 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 CCT6AP40227 531 aaKnown RBP18.86■□□□□ 0.61
NUP50-202ENST00000396096 ZNF772Q68DY9 489 aaPredicted RBP18.86■□□□□ 0.61
NUP50-202ENST00000396096 TTI2Q6NXR4 508 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 ZFPM1Q8IX07 1006 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 NYAP2Q9P242 653 aa18.86■□□□□ 0.61
NUP50-202ENST00000396096 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 H0YIN7 160 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 CASP14P31944 242 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 NAA30Q147X3 362 aaPredicted RBP18.85■□□□□ 0.61
NUP50-202ENST00000396096 TMEM266Q2M3C6 531 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 TTBK2Q6IQ55 1244 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 SRRTQ9BXP5 876 aaKnown RBP18.85■□□□□ 0.61
NUP50-202ENST00000396096 KCNQ5Q9NR82 932 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 TAB2Q9NYJ8 693 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 MAPK8IP1Q9UQF2 711 aa18.85■□□□□ 0.61
NUP50-202ENST00000396096 MPHOSPH10O00566 681 aaKnown RBP18.84■□□□□ 0.61
NUP50-202ENST00000396096 FANCGO15287 622 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 SLC37A4O43826 429 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 ECE2O60344 883 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 CCDC175P0C221 793 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
NUP50-202ENST00000396096 MRPL12P52815 198 aaKnown RBP18.84■□□□□ 0.61
NUP50-202ENST00000396096 PMS1P54277 932 aaKnown RBP18.84■□□□□ 0.61
NUP50-202ENST00000396096 GRB10Q13322 594 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 DCAF4Q8WV16 495 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 CUL5Q93034 780 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 RAB34Q9BZG1 259 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms