RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ARMC2Q8NEN0 867 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 CHURC1Q8WUH1 139 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 CSRNP1Q96S65 589 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 AHDC1Q5TGY3 1603 aaPredicted RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 CCNT1O60563 726 aaKnown RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 KLRK1P26718 216 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 PLCD1P51178 756 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 CORO7P57737 925 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 IRX1P78414 480 aaPredicted RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 RESTQ13127 1097 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 ZYXQ15942 572 aaKnown RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 ASPRV1Q53RT3 343 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 GPATCH4Q5T3I0 446 aaKnown RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 C12orf60Q5U649 245 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 PNMA8AQ86V59 439 aaPredicted RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFFL-202ENST00000394597 UBA5Q9GZZ9 404 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 TAOK3Q9H2K8 898 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 RCOR1Q9UKL0 485 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 FRMPD2Q68DX3 1309 aaPredicted RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 RGPD5Q99666 1765 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 SRGNP10124 158 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 KIF23Q02241 960 aaPredicted RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 HLTFQ14527 1009 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFFL-202ENST00000394597 STRIP1Q5VSL9 837 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 WDR78Q5VTH9 848 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 CPLX4Q7Z7G2 160 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 REXO1Q8N1G1 1221 aaKnown RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 PCDHA7Q9UN72 937 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 A0A0G2JLW4 131 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 POLR2DO15514 142 aaKnown RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 SLC8A1P32418 973 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 PPFIA1Q13136 1202 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 DEFB132Q7Z7B7 95 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 ENAHQ8N8S7 591 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 CNKSR2Q8WXI2 1034 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 EXOC1Q9NV70 894 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 PPP2R2CQ9Y2T4 447 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 CLIC4Q9Y696 253 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 TAF6LQ9Y6J9 622 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 MMP1P03956 469 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 CMA1P23946 247 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 CASP8Q14790 479 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 SLC39A14Q15043 492 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 SPECC1LQ69YQ0 1117 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 TTC19Q6DKK2 380 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 ARFGAP2Q8N6H7 521 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 IGDCC4Q8TDY8 1250 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 PIK3R5Q8WYR1 880 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 SAAL1Q96ER3 474 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 NAPGQ99747 312 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 EPB41L4AQ9HCS5 686 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 POLLQ9UGP5 575 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 BCL9LQ86UU0 1499 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 KIF3CO14782 793 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 H2AFXP16104 143 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 TM4SF1P30408 202 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 PPP4CP60510 307 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 TUBB2AQ13885 445 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 DPY19L2Q6NUT2 758 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 SRGAP1Q7Z6B7 1085 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 TXNRD3Q86VQ6 643 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 PLA2G4DQ86XP0 818 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 GPKOWQ92917 476 aaPredicted RBP eCLIP6.31□□□□□ -1.4
RFFL-202ENST00000394597 TBC1D31Q96DN5 1066 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 SH3GL3Q99963 347 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 TACO1Q9BSH4 297 aaKnown RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 TDRD3Q9H7E2 651 aaKnown RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 ZNF277Q9NRM2 450 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 POLR3EQ9NVU0 708 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 PSD3Q9NYI0 1048 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 BIN2Q9UBW5 565 aaPredicted RBP6.31□□□□□ -1.4
RFFL-202ENST00000394597 GUCA1BQ9UMX6 200 aa6.31□□□□□ -1.4
RFFL-202ENST00000394597 STK36Q9NRP7 1315 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 A0A1W2PQ27 194 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 A0A1W2PQ64 194 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 A0A1W2PQD8 194 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 HOXA10P31260 410 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 DNA2P51530 1060 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 MYL5Q02045 173 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 FCHSD1Q86WN1 690 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 SPATS2Q86XZ4 545 aaKnown RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 AIFM3Q96NN9 605 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 GPR75-ASB3A0A0A6YYF3 556 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ONECUT3O60422 494 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 ZBED4O75132 1171 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PPP6R2O75170 966 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 CDC27P30260 824 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 TXKP42681 527 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 CACNB3P54284 484 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ASIC1P78348 528 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ACTN3Q08043 901 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 DDR1Q08345 913 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 IFFO1Q0D2I5 559 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms