RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 ADGRA1Q86SQ6 560 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 ZNF579Q8NAF0 562 aaKnown RBP18.19■□□□□ 0.5
PHTF1-205ENST00000393357 STIM2Q9P246 746 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 NALCNQ8IZF0 1738 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 SNX12Q9UMY4 172 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 RIPOR2Q9Y4F9 1068 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 GTPBP6O43824 516 aaPredicted RBP18.18■□□□□ 0.5
PHTF1-205ENST00000393357 TUBBP07437 444 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 STK4Q13043 487 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
PHTF1-205ENST00000393357 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 PCDHA13Q9Y5I0 950 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
PHTF1-205ENST00000393357 NR1D1P20393 614 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 NF2P35240 595 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 UBE3CQ15386 1083 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 IQCEQ6IPM2 695 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 TEX2Q8IWB9 1127 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 AENQ8WTP8 325 aaKnown RBP18.18■□□□□ 0.5
PHTF1-205ENST00000393357 TMEM60Q9H2L4 133 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 CNNM2Q9H8M5 875 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 HAUS2Q9NVX0 235 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 SLIT1O75093 1534 aa18.18■□□□□ 0.5
PHTF1-205ENST00000393357 NEBLO76041 1014 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 KIF11P52732 1056 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 SPRED3Q2MJR0 410 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 ESR2Q92731 530 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 CCT8L2Q96SF2 557 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 AP1M1Q9BXS5 423 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 MEFVO15553 781 aaPredicted RBP18.17■□□□□ 0.5
PHTF1-205ENST00000393357 HAUS3Q68CZ6 603 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 SH3RF1Q7Z6J0 888 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
PHTF1-205ENST00000393357 ZNF473Q8WTR7 871 aaKnown RBP18.17■□□□□ 0.5
PHTF1-205ENST00000393357 UBLCP1Q8WVY7 318 aaPredicted RBP18.17■□□□□ 0.5
PHTF1-205ENST00000393357 ZHX3Q9H4I2 956 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 SLC1A4P43007 532 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 NAA25Q14CX7 972 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 FERMT2Q96AC1 680 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
PHTF1-205ENST00000393357 TLDC2A0PJX2 215 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 ZNF233A6NK53 670 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 GOLGA8KD6RF30 607 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 H7C1D1 291 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 GYG1P46976 350 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 SRBD1Q8N5C6 995 aaKnown RBP18.16■□□□□ 0.5
PHTF1-205ENST00000393357 EHBP1Q8NDI1 1231 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 BAIAP2L1Q9UHR4 511 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
PHTF1-205ENST00000393357 CCDC40Q4G0X9 1142 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 CCDC121Q6ZUS5 278 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 SUGP1Q8IWZ8 645 aaKnown RBP18.16■□□□□ 0.5
PHTF1-205ENST00000393357 MTMR8Q96EF0 704 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 ARHGAP20Q9P2F6 1191 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 ODF2LQ9ULJ1 636 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 OVOS2A0A0G2JMS6 1433 aa18.16■□□□□ 0.5
PHTF1-205ENST00000393357 CCDC194A0A1B0GVG4 234 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 LRRC53A6NM62 1247 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 TUBB4BP68371 445 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 TRIM14Q14142 442 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 LETM2Q2VYF4 491 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 ALS2CR12Q96Q35 445 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 GOLGA6L10A6NI86 522 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 USP17L12C9JPN9 530 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 USP17L21D6R901 530 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 CYP2D6P10635 497 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 DTHD1Q6ZMT9 781 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 IQCA1Q86XH1 822 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 CCDC113Q9H0I3 377 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 PLAAQ9Y263 795 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 ITIH6Q6UXX5 1313 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 TMCO5BA8MYB1 307 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 PEX19P40855 299 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 EPHB4P54760 987 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 B4GALNT4Q76KP1 1039 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 CCDC13Q8IYE1 715 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 CEP89Q96ST8 783 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 ZSCAN10Q96SZ4 725 aaPredicted RBP18.15■□□□□ 0.5
PHTF1-205ENST00000393357 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 GOPCQ9HD26 462 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 KLC4Q9NSK0 619 aa18.15■□□□□ 0.5
PHTF1-205ENST00000393357 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 PHF20L1A8MW92 1017 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 PAX7P23759 505 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 DNM2P50570 870 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 LLGL1Q15334 1064 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 PNMA8AQ86V59 439 aaPredicted RBP18.14■□□□□ 0.49
PHTF1-205ENST00000393357 NLRP14Q86W24 1093 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 ZKSCAN4Q969J2 545 aaPredicted RBP18.14■□□□□ 0.49
PHTF1-205ENST00000393357 CEP83Q9Y592 693 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 MYH13Q9UKX3 1938 aa18.14■□□□□ 0.49
PHTF1-205ENST00000393357 SPATA31A3Q5VYP0 1347 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms