RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 ARMC2Q8NEN0 867 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 EPC1Q9H2F5 836 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 DAAM1Q9Y4D1 1078 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 USP27XA6NNY8 438 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 CEBPAP49715 358 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 TTLL11Q8NHH1 800 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 LMNAP02545 664 aaKnown RBP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 YWHAGP61981 247 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 KRT28Q7Z3Y7 464 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 OSBPL1AQ9BXW6 950 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 ZCCHC17Q9NP64 241 aaKnown RBP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 PLB1Q6P1J6 1458 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 PCDHA13Q9Y5I0 950 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 STK24Q9Y6E0 443 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 SGK1O00141 431 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 INHBAP08476 426 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 KRT80Q6KB66 452 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 FGD4Q96M96 766 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 TESK2Q96S53 571 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 RTEL1Q9NZ71 1219 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 ZNF532Q9HCE3 1301 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 SRGAP2O75044 1071 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 PDE6CP51160 858 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 TUBB6Q9BUF5 446 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 TRIML2Q8N7C3 387 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 TUBGCP2Q9BSJ2 902 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 LSG1Q9H089 658 aaKnown RBP17.61■□□□□ 0.41
SHANK1-204ENST00000391814 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-204ENST00000391814 MAPK13O15264 365 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 KRT19P08727 400 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 BFSP1Q12934 665 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 MESDQ14696 234 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 CHRNA2Q15822 529 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 CAPRIN2Q6IMN6 1127 aaKnown RBP17.61■□□□□ 0.41
SHANK1-204ENST00000391814 TCP11X2Q5H9J9 407 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 ZMYND12Q9H0C1 365 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 POGZQ7Z3K3 1410 aa17.61■□□□□ 0.41
SHANK1-204ENST00000391814 MMEP08473 750 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 PLS3P13797 630 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 RSBN1LQ6PCB5 846 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 MAML1Q92585 1016 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ACSBG1Q96GR2 724 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 SAMSN1Q9NSI8 373 aaKnown RBP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ZNF148Q9UQR1 794 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 EYA2O00167 538 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ITGA6P23229 1130 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ASPHQ12797 758 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 USH1GQ495M9 461 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 CCDC138Q96M89 665 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 KLC4Q9NSK0 619 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 PPP1R12AO14974 1030 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ANKRD35Q8N283 1001 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 IWS1Q96ST2 819 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 MAD1L1Q9Y6D9 718 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 EXOC5O00471 708 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ESRRAP11474 423 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ZAP70P43403 619 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ADCK5Q3MIX3 580 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 CXorf56Q9H5V9 222 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 ANAPC5Q9UJX4 755 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 GSTA1P08263 222 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 GSTA2P09210 222 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 RFC4P35249 363 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 IDI1Q13907 227 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 SEPT2Q15019 361 aa17.6■□□□□ 0.41
SHANK1-204ENST00000391814 DZIP3Q86Y13 1208 aaKnown RBP17.6■□□□□ 0.41
SHANK1-204ENST00000391814 GRAMD1BQ3KR37 738 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 NUDCD3Q8IVD9 361 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 H2AFZP0C0S5 128 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 SCYL2Q6P3W7 929 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 H2AFVQ71UI9 128 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 ZC4H2Q9NQZ6 224 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 SMYD2Q9NRG4 433 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 ANKFY1Q9P2R3 1169 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 PGRMC1O00264 195 aaKnown RBP17.59■□□□□ 0.41
SHANK1-204ENST00000391814 PLCG2P16885 1265 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 RFX1P22670 979 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 GARSP41250 739 aaKnown RBP17.59■□□□□ 0.41
SHANK1-204ENST00000391814 TRIP13Q15645 432 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-204ENST00000391814 RBM26Q5T8P6 1007 aaKnown RBP17.59■□□□□ 0.41
SHANK1-204ENST00000391814 DENND2AQ9ULE3 1009 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 SPAG7O75391 227 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 CD19P15391 556 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 SLFNL1Q499Z3 407 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 ZNF711Q9Y462 761 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 WDR46O15213 610 aaKnown RBP17.59■□□□□ 0.41
SHANK1-204ENST00000391814 FBXW10Q5XX13 1052 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 CCDC117Q8IWD4 279 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-204ENST00000391814 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
SHANK1-204ENST00000391814 ATXN8OSP0DMR3 200 aa17.58■□□□□ 0.41
SHANK1-204ENST00000391814 NLRP14Q86W24 1093 aa17.58■□□□□ 0.41
SHANK1-204ENST00000391814 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms