RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TYW1Q9NV66 732 aaKnown RBP21.61■■□□□ 1.05
SHANK1-203ENST00000391813 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.61■■□□□ 1.05
SHANK1-203ENST00000391813 RPN1P04843 607 aaKnown RBP21.61■■□□□ 1.05
SHANK1-203ENST00000391813 NUF2Q9BZD4 464 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 EPB41L5Q9HCM4 733 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 C1orf167Q5SNV9 1468 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 FRMD3A2A2Y4 597 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 GRM1Q13255 1194 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 HIBCHQ6NVY1 386 aaPredicted RBP21.61■■□□□ 1.05
SHANK1-203ENST00000391813 MYCNP04198 464 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 RNASELQ05823 741 aaKnown RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 Q9H521 79 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 PALLDQ8WX93 1383 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 BUB1O43683 1085 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 BBOX1O75936 387 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 SERPINB2P05120 415 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 SEPT14Q6ZU15 432 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 TRIM6Q9C030 488 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 TMOD4Q9NZQ9 345 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 NDUFB9Q9Y6M9 179 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 DIP2BQ9P265 1576 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 INO80Q9ULG1 1556 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 PIGBQ92521 554 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 KRT12Q99456 494 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 BPIFA3Q9BQP9 254 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 LSM14BQ9BX40 385 aaKnown RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 DPH5Q9H2P9 285 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 CYP2E1P05181 493 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-203ENST00000391813 TRPC3Q13507 836 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 ARID5BQ14865 1188 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
SHANK1-203ENST00000391813 CTNND1O60716 968 aaKnown RBP21.59■■□□□ 1.05
SHANK1-203ENST00000391813 GOLGA8FQ08AF8 430 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 GOLGA8DPQ0D2H9 430 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 DYMQ7RTS9 669 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 TUBGCP2Q9BSJ2 902 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 NT5C3AQ9H0P0 336 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 FOXP1Q9H334 677 aaPredicted RBP21.59■■□□□ 1.05
SHANK1-203ENST00000391813 KCNJ6P48051 423 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 GRK7Q8WTQ7 553 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 SOWAHDA6NJG2 315 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 ZMYND10O75800 440 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 NAA30Q147X3 362 aaPredicted RBP21.59■■□□□ 1.05
SHANK1-203ENST00000391813 MYOCDQ8IZQ8 938 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 GJD4Q96KN9 370 aaPredicted RBP21.59■■□□□ 1.05
SHANK1-203ENST00000391813 BZW2Q9Y6E2 419 aaKnown RBP21.59■■□□□ 1.05
SHANK1-203ENST00000391813 WDR44Q5JSH3 913 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 TEKT1Q969V4 418 aa21.59■■□□□ 1.05
SHANK1-203ENST00000391813 CAMSAP1Q5T5Y3 1602 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 NDUFA10O95299 355 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 LONP1P36776 959 aaKnown RBP21.58■■□□□ 1.05
SHANK1-203ENST00000391813 SRLQ86TD4 932 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 NCAPGQ9BPX3 1015 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 TPX2Q9ULW0 747 aaKnown RBP21.58■■□□□ 1.05
SHANK1-203ENST00000391813 ZDHHC9Q9Y397 364 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 CYP21A2P08686 494 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 GBP7Q8N8V2 638 aaPredicted RBP21.58■■□□□ 1.05
SHANK1-203ENST00000391813 FANCBQ8NB91 859 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 MAK16Q9BXY0 300 aaKnown RBP21.58■■□□□ 1.05
SHANK1-203ENST00000391813 AGTPBP1Q9UPW5 1226 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 LEMD3Q9Y2U8 911 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 RABGAP1Q9Y3P9 1069 aa21.58■■□□□ 1.05
SHANK1-203ENST00000391813 RFC1P35251 1148 aaPredicted RBP21.58■■□□□ 1.04
SHANK1-203ENST00000391813 EHHADHQ08426 723 aa21.58■■□□□ 1.04
SHANK1-203ENST00000391813 CLEC4GQ6UXB4 293 aa21.58■■□□□ 1.04
SHANK1-203ENST00000391813 DDX23Q9BUQ8 820 aaKnown RBP21.58■■□□□ 1.04
SHANK1-203ENST00000391813 NOP53Q9NZM5 478 aaKnown RBP21.58■■□□□ 1.04
SHANK1-203ENST00000391813 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.04
SHANK1-203ENST00000391813 SLFN14P0C7P3 912 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 ZAP70P43403 619 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 GYS2P54840 703 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 EIF3BP55884 814 aaKnown RBP21.57■■□□□ 1.04
SHANK1-203ENST00000391813 KIF23Q02241 960 aaPredicted RBP21.57■■□□□ 1.04
SHANK1-203ENST00000391813 MRRFQ96E11 262 aaKnown RBP21.57■■□□□ 1.04
SHANK1-203ENST00000391813 OPHN1O60890 802 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 ADRA2BP18089 450 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 CCDC13Q8IYE1 715 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 ACRBPQ8NEB7 543 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 U2AF1L4Q8WU68 220 aaKnown RBP21.57■■□□□ 1.04
SHANK1-203ENST00000391813 CUEDC2Q9H467 287 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 ZNF532Q9HCE3 1301 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 BBOF1Q8ND07 529 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 MAN1B1Q9UKM7 699 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 RPS6KA4O75676 772 aa21.57■■□□□ 1.04
SHANK1-203ENST00000391813 XRCC5P13010 732 aaKnown RBP21.57■■□□□ 1.04
SHANK1-203ENST00000391813 DHTKD1Q96HY7 919 aaPredicted RBP21.57■■□□□ 1.04
SHANK1-203ENST00000391813 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 SEMA3EO15041 775 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 CTIFO43310 598 aaKnown RBP21.56■■□□□ 1.04
SHANK1-203ENST00000391813 ZBED6P86452 979 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 CALCRLQ16602 461 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 GLE1Q53GS7 698 aaKnown RBP21.56■■□□□ 1.04
SHANK1-203ENST00000391813 LARGE1O95461 756 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 TBC1D8O95759 1140 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 IL9RQ01113 521 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms