RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SH2D4AQ9H788 454 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 EBF2Q9HAK2 575 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TMBIM4Q9HC24 238 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 POLD4Q9HCU8 107 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 PIH1D3Q9NQM4 214 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 KLC4Q9NSK0 619 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SMARCAL1Q9NZC9 954 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 EHD2Q9NZN4 543 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 VPS54Q9P1Q0 977 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CNOT8Q9UFF9 292 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 DDX20Q9UHI6 824 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 FAM153AQ9UHL3 310 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 HOOK1Q9UJC3 728 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TMEM59LQ9UK28 342 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 FBXO3Q9UK99 471 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 GUCA1BQ9UMX6 200 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 KCNJ14Q9UNX9 436 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SIK3Q9Y2K2 1263 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 DUSP10Q9Y6W6 482 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 LOXHD1Q8IVV2 1947 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 COL5A3P25940 1745 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 A0A087WZG4 1122 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 A0A1W2PQJ5 194 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 SHTN1A0MZ66 631 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 KLHL33A6NCF5 533 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 TRIM49BA6NDI0 452 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ZSCAN5CA6NGD5 496 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ATP5J2-PTCD1G3V325 749 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 RBAK-RBAKDNI3L0D1 243 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 KIF3CO14782 793 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CPLX1O14810 134 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 OPLAHO14841 1288 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PPP1R12AO14974 1030 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 N4BP3O15049 544 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 EPHB6O15197 1021 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 OPA1O60313 960 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PTCD1O75127 700 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 COBLO75128 1261 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 FAM107AO95990 144 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PLEKP08567 350 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PARP1P09874 1014 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 GHRP10912 638 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ALADP13716 330 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PHKG2P15735 406 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 KCNA6P17658 529 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 DRD4P21917 467 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PAX7P23759 505 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 BRD2P25440 801 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ARID4AP29374 1257 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 MDH1P40925 334 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 IARSP41252 1262 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PRCPP42785 496 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 KLK7P49862 253 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 MNAT1P51948 309 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 SEC24CP53992 1094 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 GUCY1A3Q02108 690 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 NEXNQ0ZGT2 675 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PAK1Q13153 545 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 KCNB1Q14721 858 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CRYMQ14894 314 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 UBE3CQ15386 1083 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CCDC40Q4G0X9 1142 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ZNF658Q5TYW1 1059 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 TTC19Q6DKK2 380 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PPP4R3AQ6IN85 833 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 RCSD1Q6JBY9 416 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 KLHL10Q6JEL2 608 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CYB5D1Q6P9G0 228 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 POTEAQ6S8J7 498 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 RALYLQ86SE5 291 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 IQCA1Q86XH1 822 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ANKLE2Q86XL3 938 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ANKRD18AQ8IVF6 992 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CCDC170Q8IYT3 715 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ADSSL1Q8N142 457 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 THEMISQ8N1K5 641 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CRACR2BQ8N4Y2 399 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ABTB2Q8N961 1025 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 EIF1ADQ8N9N8 165 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 EHBP1Q8NDI1 1231 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 OLIG1Q8TAK6 271 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 SMCR8Q8TEV9 937 aaPredicted RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 NELFBQ8WX92 580 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CASKIN2Q8WXE0 1202 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CCT6BQ92526 530 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 BAP1Q92560 729 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 TATDN2Q93075 761 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CNKSR1Q969H4 720 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 FAM212AQ96EL1 285 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 SGSM3Q96HU1 749 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CAPZA3Q96KX2 299 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 ATP6V1G3Q96LB4 118 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 CCT8L2Q96SF2 557 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 STRBPQ96SI9 672 aaKnown RBP3.85□□□□□ -1.79
TRAV39-201ENST00000390466 OSBPL9Q96SU4 736 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 PHF20Q9BVI0 1012 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 TXLNGYQ9BZA5 131 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 VPS16Q9H269 839 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 EPB41L4BQ9H329 900 aa3.85□□□□□ -1.79
TRAV39-201ENST00000390466 RABEP2Q9H5N1 569 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms