RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 REXO1Q8N1G1 1221 aaKnown RBP4.7□□□□□ -1.66
SMC6-202ENST00000381272 NGEFQ8N5V2 710 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 FAM168AQ92567 244 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 CCDC120Q96HB5 630 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 KREMEN1Q96MU8 473 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 KIF2CQ99661 725 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 SPON2Q9BUD6 331 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 ASPNQ9BXN1 380 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 GPR62Q9BZJ7 368 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 DUSP15Q9H1R2 295 aaPredicted RBP4.7□□□□□ -1.66
SMC6-202ENST00000381272 EHMT1Q9H9B1 1298 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 CFAP74Q9C0B2 1584 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 IQSEC2Q5JU85 1478 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 NEXMIFQ5QGS0 1516 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 VIRMAQ69YN4 1812 aaKnown RBP4.7□□□□□ -1.66
SMC6-202ENST00000381272 RBAK-RBAKDNI3L0D1 243 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 U2SURPO15042 1029 aaKnown RBP4.69□□□□□ -1.66
SMC6-202ENST00000381272 TPP2P29144 1249 aaPredicted RBP4.69□□□□□ -1.66
SMC6-202ENST00000381272 MCM4P33991 863 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 ZNF165P49910 485 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 FANCCQ00597 558 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 ARSHQ5FYA8 562 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 GK5Q6ZS86 529 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 USP48Q86UV5 1035 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 TSR2Q969E8 191 aaKnown RBP4.69□□□□□ -1.66
SMC6-202ENST00000381272 NKD1Q969G9 470 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 ALPK1Q96QP1 1244 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 CTNND2Q9UQB3 1225 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 USP32Q8NFA0 1604 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 SRFP11831 508 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 AFMP43652 599 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 CREG2Q8IUH2 290 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 SLITRK4Q8IW52 837 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 RNF34Q969K3 372 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMC6-202ENST00000381272 GOLGA2P5Q9HBQ8 144 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 USP35Q9P2H5 1018 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 PIK3C2BO00750 1634 aa4.69□□□□□ -1.66
SMC6-202ENST00000381272 ANKRD36BQ8N2N9 1353 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 DIP2CQ9Y2E4 1556 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 LRRN2O75325 713 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 ESR1P03372 595 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 VAMP1P23763 118 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 GDNFP39905 211 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 CLCQ05315 142 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 GAB4Q2WGN9 574 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 LRRFIP1Q32MZ4 808 aaKnown RBP4.68□□□□□ -1.66
SMC6-202ENST00000381272 CDCP2Q5VXM1 449 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 OVOS1Q6IE37 1185 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 OGFOD2Q6N063 350 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 TSPYL5Q86VY4 417 aaPredicted RBP4.68□□□□□ -1.66
SMC6-202ENST00000381272 ZSWIM9Q86XI8 627 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 PMFBP1Q8TBY8 1022 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 TMEM40Q8WWA1 233 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 EAF1Q96JC9 268 aaPredicted RBP4.68□□□□□ -1.66
SMC6-202ENST00000381272 PRAM1Q96QH2 718 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 SLAMF8Q9P0V8 285 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 DUSP13Q9UII6 198 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 USP19O94966 1318 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 A0A1W2PP64 1363 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 NINLQ9Y2I6 1382 aa4.68□□□□□ -1.66
SMC6-202ENST00000381272 WASH4PA8MWX3 477 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 SCAMP3O14828 347 aaKnown RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 IGSF3O75054 1194 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 FRAT2O75474 233 aaPredicted RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 UBOX5O94941 541 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 RNF4P78317 190 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 EXOSC9Q06265 439 aaKnown RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 KCNMB1Q16558 191 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 ZNF394Q53GI3 561 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 NLRC3Q7RTR2 1065 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 ATG4CQ96DT6 458 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 PUS7Q96PZ0 661 aaKnown RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 ASCC2Q9H1I8 757 aaPredicted RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 MYH16Q9H6N6 1097 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 CNNM2Q9H8M5 875 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 POGKQ9P215 609 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 YEATS2Q9ULM3 1422 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 FYB1O15117 783 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 FBLN1P23142 703 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 LTKP29376 864 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 CCNFP41002 786 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 TMPOP42166 694 aaKnown RBP4.67□□□□□ -1.66
SMC6-202ENST00000381272 RAD51AP2Q09MP3 1159 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 ZKSCAN2Q63HK3 967 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 POU5F2Q8N7G0 328 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 VWCEQ96DN2 955 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 PLEKHF1Q96S99 279 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 CDK19Q9BWU1 502 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 C19orf73Q9NVV2 129 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 TMEM59LQ9UK28 342 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 MAPK8IP3Q9UPT6 1336 aa4.67□□□□□ -1.66
SMC6-202ENST00000381272 NSD2O96028 1365 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 PREX1Q8TCU6 1659 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 RICTORQ6R327 1708 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 NEO1Q92859 1461 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms