RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 TPCN1Q9ULQ1 816 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 EXOC7Q9UPT5 735 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L15C9J2P7 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L11C9JVI0 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L18D6R9N7 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L22D6RA61 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L19D6RCP7 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L20D6RJB6 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 N4BP1O75113 896 aaKnown RBP6.15□□□□□ -1.42
GEN1-202ENST00000381254 TCP1P17987 556 aaKnown RBP6.15□□□□□ -1.42
GEN1-202ENST00000381254 MAN1A1P33908 653 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 KRT2P35908 639 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 USP17L24Q0WX57 530 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 CCDC65Q8IXS2 484 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 EDC3Q96F86 508 aaKnown RBP6.15□□□□□ -1.42
GEN1-202ENST00000381254 GINM1Q9NU53 330 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 SUGT1Q9Y2Z0 365 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 PTCH2Q9Y6C5 1203 aa6.15□□□□□ -1.42
GEN1-202ENST00000381254 BZW2Q9Y6E2 419 aaKnown RBP6.15□□□□□ -1.42
GEN1-202ENST00000381254 ZNF536O15090 1300 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 RPTORQ8N122 1335 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 PALM3A6NDB9 673 aaPredicted RBP6.15□□□□□ -1.43
GEN1-202ENST00000381254 MYL3P08590 195 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 CMA1P23946 247 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 MFSD14AQ96MC6 490 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 SGIP1Q9BQI5 828 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 METTL14Q9HCE5 456 aaKnown RBP6.15□□□□□ -1.43
GEN1-202ENST00000381254 ZNF70Q9UC06 446 aaPredicted RBP6.15□□□□□ -1.43
GEN1-202ENST00000381254 FBXO40Q9UH90 709 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 ANXA13P27216 316 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 NLRP12P59046 1061 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 IRX4P78413 519 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.43
GEN1-202ENST00000381254 TMEM31Q5JXX7 168 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 ANO1Q5XXA6 986 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 TTLL7Q6ZT98 887 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 NLRP10Q86W26 655 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 ABI1Q8IZP0 508 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.43
GEN1-202ENST00000381254 MMP19Q99542 508 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 SRRDQ9UH36 339 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 SLC4A7Q9Y6M7 1214 aa6.15□□□□□ -1.43
GEN1-202ENST00000381254 SEC24BO95487 1268 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 INHAP05111 366 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 RNASELQ05823 741 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 STK3Q13188 491 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 MAP7Q14244 749 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 UBE3CQ15386 1083 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 U2AF1L4Q8WU68 220 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.14□□□□□ -1.43
GEN1-202ENST00000381254 AAASQ9NRG9 546 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 PTPDC1A2A3K4 754 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 TSPY2A6NKD2 308 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 PFKFB2O60825 505 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 STAT6P42226 847 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 FPGSQ05932 587 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 PAK2Q13177 524 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 ENOX2Q16206 610 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 CDC37Q16543 378 aaPredicted RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 CCDC14Q49A88 953 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 ANO6Q4KMQ2 910 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 IFT20Q8IY31 132 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 P3H4Q92791 437 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 TSNARE1Q96NA8 513 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 NAPGQ99747 312 aaPredicted RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 IMPG2Q9BZV3 1241 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 FAM184BQ9ULE4 1060 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 EFCAB8A8MWE9 144 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 H0YGN5 161 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 NOP56O00567 594 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 GNAT1P11488 350 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 ALADP13716 330 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 MNX1P50219 401 aaPredicted RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 ZNF75DP51815 510 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 AK2P54819 239 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 CALCOCO2Q13137 446 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 MAP3K21Q5TCX8 1036 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 NEK11Q8NG66 645 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 AK8Q96MA6 479 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 GSDMAQ96QA5 445 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 EDEM3Q9BZQ6 932 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 PUF60Q9UHX1 559 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 KDM3AQ9Y4C1 1321 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 KDRP35968 1356 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 FOXP2O15409 715 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 FLOT1O75955 427 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 DNAJC21Q5F1R6 531 aaKnown RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 RRAGBQ5VZM2 374 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 PPP2R2DQ66LE6 453 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 TDHQ8IZJ6 230 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 FAM114A2Q9NRY5 505 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 IKBKGQ9Y6K9 419 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.14□□□□□ -1.43
GEN1-202ENST00000381254 GSTTP1A0A1W2PQM5 241 aa6.14□□□□□ -1.43
GEN1-202ENST00000381254 YWHAEP62258 255 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms