RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ASB14A6NK59 587 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 TRIM6-TRIM34B2RNG4 842 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 DLL1O00548 723 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 HAND2P61296 217 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 FPGSQ05932 587 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 TTBK2Q6IQ55 1244 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 TMEM47Q9BQJ4 181 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 RANBP17Q9H2T7 1088 aaKnown RBP19.9■□□□□ 0.78
SMN2-201ENST00000380741 CYP39A1Q9NYL5 469 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 TBX21Q9UL17 535 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 MROH7Q68CQ1 1323 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 CUL9Q8IWT3 2517 aa19.9■□□□□ 0.78
SMN2-201ENST00000380741 A0A0U1RQG5 324 aaPredicted RBP19.89■□□□□ 0.77
SMN2-201ENST00000380741 ICAM1P05362 532 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 TOP1P11387 765 aaKnown RBP19.89■□□□□ 0.77
SMN2-201ENST00000380741 SLC16A2P36021 539 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 CDK7P50613 346 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 SMAD3P84022 425 aaKnown RBP19.89■□□□□ 0.77
SMN2-201ENST00000380741 TNFAIP2Q03169 654 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 B4GALNT3Q6L9W6 998 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 BTNL9Q6UXG8 535 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 NOL8Q76FK4 1167 aaKnown RBP19.89■□□□□ 0.77
SMN2-201ENST00000380741 SMC5Q8IY18 1101 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 RILPL2Q969X0 211 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 VTI1AQ96AJ9 217 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 RNPC3Q96LT9 517 aaKnown RBP19.89■□□□□ 0.77
SMN2-201ENST00000380741 TCP11L1Q9NUJ3 509 aa19.89■□□□□ 0.77
SMN2-201ENST00000380741 PRUNE2Q8WUY3 3088 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 FRMPD2Q68DX3 1309 aaPredicted RBP19.88■□□□□ 0.77
SMN2-201ENST00000380741 ARVCFO00192 962 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 TIMP1P01033 207 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 NKX3-2P78367 333 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 BEX3Q00994 111 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 SYDE2Q5VT97 1194 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 NSMFQ6X4W1 530 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 PURBQ96QR8 312 aaKnown RBP19.88■□□□□ 0.77
SMN2-201ENST00000380741 GNEQ9Y223 722 aaKnown RBP19.88■□□□□ 0.77
SMN2-201ENST00000380741 LAMA4Q16363 1823 aa19.88■□□□□ 0.77
SMN2-201ENST00000380741 VCANP13611 3396 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 PTGS1P23219 599 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 AAMPQ13685 434 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 TLK2Q86UE8 772 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 TBC1D10CQ8IV04 446 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 FBXO16Q8IX29 292 aaPredicted RBP19.87■□□□□ 0.77
SMN2-201ENST00000380741 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
SMN2-201ENST00000380741 SEMA6BQ9H3T3 888 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 PDGFCQ9NRA1 345 aa19.87■□□□□ 0.77
SMN2-201ENST00000380741 PDHBP11177 359 aa19.86■□□□□ 0.77
SMN2-201ENST00000380741 SMPD1P17405 629 aa19.86■□□□□ 0.77
SMN2-201ENST00000380741 AKNAD1Q5T1N1 836 aa19.86■□□□□ 0.77
SMN2-201ENST00000380741 MFSD6Q6ZSS7 791 aa19.86■□□□□ 0.77
SMN2-201ENST00000380741 EEPD1Q7L9B9 569 aa19.86■□□□□ 0.77
SMN2-201ENST00000380741 FAM126BQ8IXS8 530 aa19.86■□□□□ 0.77
SMN2-201ENST00000380741 CDX2Q99626 313 aaPredicted RBP19.86■□□□□ 0.77
SMN2-201ENST00000380741 TTYH1Q9H313 450 aaPredicted RBP19.86■□□□□ 0.77
SMN2-201ENST00000380741 RWDD1Q9H446 243 aaPredicted RBP19.86■□□□□ 0.77
SMN2-201ENST00000380741 NFIBO00712 420 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 SDSP20132 328 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 BAATQ14032 418 aaPredicted RBP19.85■□□□□ 0.77
SMN2-201ENST00000380741 FSCN1Q16658 493 aaKnown RBP19.85■□□□□ 0.77
SMN2-201ENST00000380741 MFSD5Q6N075 450 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 TAPT1Q6NXT6 567 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 CXCL17Q6UXB2 119 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 CHD1LQ86WJ1 897 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 PLEKHM2Q8IWE5 1019 aa19.85■□□□□ 0.77
SMN2-201ENST00000380741 NEDD4P46934 1319 aa19.84■□□□□ 0.77
SMN2-201ENST00000380741 DYNC1LI2O43237 492 aaPredicted RBP19.84■□□□□ 0.77
SMN2-201ENST00000380741 IGHDP01880 384 aa19.84■□□□□ 0.77
SMN2-201ENST00000380741 PCP11498 1178 aaKnown RBP19.84■□□□□ 0.77
SMN2-201ENST00000380741 TMEM63BQ5T3F8 832 aa19.84■□□□□ 0.77
SMN2-201ENST00000380741 MORC4Q8TE76 937 aa19.84■□□□□ 0.77
SMN2-201ENST00000380741 AP5M1Q9H0R1 490 aa19.84■□□□□ 0.77
SMN2-201ENST00000380741 VTA1Q9NP79 307 aa19.84■□□□□ 0.77
SMN2-201ENST00000380741 TLR3O15455 904 aaKnown RBP19.83■□□□□ 0.77
SMN2-201ENST00000380741 ALDH5A1P51649 535 aaPredicted RBP19.83■□□□□ 0.77
SMN2-201ENST00000380741 MFAP1P55081 439 aaKnown RBP19.83■□□□□ 0.77
SMN2-201ENST00000380741 NUCB1Q02818 461 aa19.83■□□□□ 0.77
SMN2-201ENST00000380741 ZNF543Q08ER8 600 aa19.83■□□□□ 0.77
SMN2-201ENST00000380741 IQSEC1Q6DN90 963 aa19.83■□□□□ 0.77
SMN2-201ENST00000380741 TTC14Q96N46 770 aa19.83■□□□□ 0.77
SMN2-201ENST00000380741 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMN2-201ENST00000380741 PPP1R12CQ9BZL4 782 aa19.83■□□□□ 0.77
SMN2-201ENST00000380741 OSBPL3Q9H4L5 887 aa19.83■□□□□ 0.77
SMN2-201ENST00000380741 RNF41Q9H4P4 317 aaPredicted RBP19.83■□□□□ 0.77
SMN2-201ENST00000380741 ADD3Q9UEY8 706 aaKnown RBP19.83■□□□□ 0.77
SMN2-201ENST00000380741 PTPDC1A2A3K4 754 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 CABYRO75952 493 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 CD4P01730 458 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 SNHG28P0DPA3 235 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 PPIGQ13427 754 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMN2-201ENST00000380741 CWC27Q6UX04 472 aaKnown RBP19.82■□□□□ 0.76
SMN2-201ENST00000380741 SLC30A10Q6XR72 485 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 KIAA1211Q6ZU35 1233 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 C16orf59Q7L2K0 433 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 SLC43A3Q8NBI5 491 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 CLEC4DQ8WXI8 215 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 ZKSCAN3Q9BRR0 538 aa19.82■□□□□ 0.76
SMN2-201ENST00000380741 Q9Y3F1 56 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms