RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TAOK1Q7L7X3 1001 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 PPM1KQ8N3J5 372 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 PARP2Q9UGN5 583 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 SYNJ2BP-COX16A0A087WUM0 186 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 ODR4Q5SWX8 454 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 EEPD1Q7L9B9 569 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 RETREG2Q8NC44 543 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 MAIP1Q8WWC4 291 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 ATP6V0A1Q93050 837 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 COX16Q9P0S2 106 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 AMFRQ9UKV5 643 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 ZHX1Q9UKY1 873 aaPredicted RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 FAM184BQ9ULE4 1060 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 SCRN1Q12765 414 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 TUBB2AQ13885 445 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 AFAP1L2Q8N4X5 818 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 RASGRP4Q8TDF6 673 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 TUBB2BQ9BVA1 445 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 PCDHA4Q9UN74 947 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 NUB1Q9Y5A7 615 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 AFF2P51816 1311 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 ZCCHC11Q5TAX3 1644 aaKnown RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 MAN1A1P33908 653 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 ADKP55263 362 aaKnown RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 ADAM9Q13443 819 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 SEPT10Q9P0V9 454 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 USP17L8P0C7I0 530 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 LONP1P36776 959 aaKnown RBP14.97□□□□□ -0.01
GPC6-201ENST00000377047 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
GPC6-201ENST00000377047 PI4KBQ9UBF8 816 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SPDYE16A6NNV3 312 aaPredicted RBP14.97□□□□□ -0.01
GPC6-201ENST00000377047 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SLC12A2P55011 1212 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SYDE2Q5VT97 1194 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 PI16Q6UXB8 463 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SRGAP1Q7Z6B7 1085 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SLC10A4Q96EP9 437 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 TSKSQ9UJT2 592 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 CLIC4Q9Y696 253 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 HADHQ16836 314 aaKnown RBP14.97□□□□□ -0.01
GPC6-201ENST00000377047 CFAP221Q4G0U5 840 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 GJA10Q969M2 543 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 IQCDQ96DY2 449 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 PIGSQ96S52 555 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 PIM2Q9P1W9 311 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 ABCA8O94911 1581 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 ARHGAP6O43182 974 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 GTPBP6O43824 516 aaPredicted RBP14.97□□□□□ -0.01
GPC6-201ENST00000377047 ZNF827Q17R98 1081 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 KIAA1468Q9P260 1216 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 PRR36Q9H6K5 1346 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 GOLGA6CA6NDK9 693 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 GOLGA6BA6NDN3 693 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 HNRNPDLO14979 420 aaKnown RBP14.97□□□□□ -0.01
GPC6-201ENST00000377047 GOLGA6DP0CG33 693 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 FAM26FQ5R3K3 315 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.97□□□□□ -0.01
GPC6-201ENST00000377047 GOLGA6AQ9NYA3 693 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 RNF123Q5XPI4 1314 aa14.97□□□□□ -0.01
GPC6-201ENST00000377047 CLCN1P35523 988 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 CARD6Q9BX69 1037 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 DISC1Q9NRI5 854 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 SLC7A3Q8WY07 619 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 VPS37BQ9H9H4 285 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 CCDC160A6NGH7 325 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 INO80B-WBP1J3KQ70 363 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 EBAG9O00559 213 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 MNAT1P51948 309 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 MECOMQ03112 1051 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 PPP2R5AQ15172 486 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 LGSNQ5TDP6 509 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 INO80BQ9C086 356 aaPredicted RBP14.96□□□□□ -0.01
GPC6-201ENST00000377047 XPO4Q9C0E2 1151 aaKnown RBP14.96□□□□□ -0.01
GPC6-201ENST00000377047 PLEKHA4Q9H4M7 779 aa14.96□□□□□ -0.01
GPC6-201ENST00000377047 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.02
GPC6-201ENST00000377047 KIF11P52732 1056 aa14.96□□□□□ -0.02
GPC6-201ENST00000377047 FMNL1O95466 1100 aaPredicted RBP14.95□□□□□ -0.02
GPC6-201ENST00000377047 LSG1Q9H089 658 aaKnown RBP14.95□□□□□ -0.02
GPC6-201ENST00000377047 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
GPC6-201ENST00000377047 PPARDQ03181 441 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 RNASELQ05823 741 aaKnown RBP14.95□□□□□ -0.02
GPC6-201ENST00000377047 CUL4BQ13620 913 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 PTPROQ16827 1216 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 ERCC6LQ2NKX8 1250 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 COA7Q96BR5 231 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 KRBA2Q6ZNG9 492 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 COA1Q9GZY4 146 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 XPOTO43592 962 aaKnown RBP14.95□□□□□ -0.02
GPC6-201ENST00000377047 HHATQ5VTY9 493 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 ZNF589Q86UQ0 364 aaPredicted RBP14.95□□□□□ -0.02
GPC6-201ENST00000377047 NLRP7Q8WX94 980 aa14.95□□□□□ -0.02
GPC6-201ENST00000377047 SYNMO15061 1565 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms