RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 GLT1D1Q96MS3 346 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 ZSCAN10Q96SZ4 725 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-201ENST00000372235 UBAC1Q9BSL1 405 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 STARD7Q9NQZ5 370 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 ELP1O95163 1332 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 C6orf222P0C671 652 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-201ENST00000372235 GJA9P57773 515 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 MDM2Q00987 491 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-201ENST00000372235 IQSEC1Q6DN90 963 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 TTBK2Q6IQ55 1244 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 PNMA1Q8ND90 353 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 FGD4Q96M96 766 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 TOX2Q96NM4 488 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 SEZ6LQ9BYH1 1024 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 UPF3AQ9H1J1 476 aaKnown RBP22.13■■□□□ 1.13
TMEM53-201ENST00000372235 Q9Y3F1 56 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 U3KPZ7 1027 aaPredicted RBP22.13■■□□□ 1.13
TMEM53-201ENST00000372235 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
TMEM53-201ENST00000372235 DCDC2CA8MYV0 355 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 ZEB2O60315 1214 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 NKX3-2P78367 333 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 TNFAIP2Q03169 654 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 KCNA10Q16322 511 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 ASPRV1Q53RT3 343 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 VTA1Q9NP79 307 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 PRDM5Q9NQX1 630 aaPredicted RBP22.12■■□□□ 1.13
TMEM53-201ENST00000372235 SMCHD1A6NHR9 2005 aa22.12■■□□□ 1.13
TMEM53-201ENST00000372235 SOWAHBA6NEL2 793 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 B4E1Z4 1266 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 CLTBP09497 229 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 PDE4AP27815 886 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 SNAP25P60880 206 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 MUM1L1Q5H9M0 696 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 NOL8Q76FK4 1167 aaKnown RBP22.11■■□□□ 1.13
TMEM53-201ENST00000372235 RGS22Q8NE09 1264 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 ZKSCAN3Q9BRR0 538 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 ZSWIM5Q9P217 1185 aa22.11■■□□□ 1.13
TMEM53-201ENST00000372235 TRIOBPQ9H2D6 2365 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 CABYRO75952 493 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 GSPT1P15170 499 aaKnown RBP22.1■■□□□ 1.13
TMEM53-201ENST00000372235 GNASQ5JWF2 1037 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 CCSAPQ6IQ19 270 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-201ENST00000372235 RNF207Q6ZRF8 634 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 ANKRD33Q7Z3H0 272 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 MORC4Q8TE76 937 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 KATNBL1Q9H079 304 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 AP5M1Q9H0R1 490 aa22.1■■□□□ 1.13
TMEM53-201ENST00000372235 TNKSO95271 1327 aa22.09■■□□□ 1.13
TMEM53-201ENST00000372235 PTPDC1A2A3K4 754 aa22.09■■□□□ 1.13
TMEM53-201ENST00000372235 TLE2Q04725 743 aa22.09■■□□□ 1.13
TMEM53-201ENST00000372235 BAATQ14032 418 aaPredicted RBP22.09■■□□□ 1.13
TMEM53-201ENST00000372235 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
TMEM53-201ENST00000372235 RASGRP2Q7LDG7 609 aa22.09■■□□□ 1.13
TMEM53-201ENST00000372235 DNERQ8NFT8 737 aa22.09■■□□□ 1.13
TMEM53-201ENST00000372235 PDLIM7Q9NR12 457 aa22.09■■□□□ 1.13
TMEM53-201ENST00000372235 A0A0U1RQG5 324 aaPredicted RBP22.08■■□□□ 1.13
TMEM53-201ENST00000372235 ERICH2A1L162 156 aa22.08■■□□□ 1.13
TMEM53-201ENST00000372235 ASGR1P07306 291 aa22.08■■□□□ 1.13
TMEM53-201ENST00000372235 PARP1P09874 1014 aaKnown RBP22.08■■□□□ 1.13
TMEM53-201ENST00000372235 CHMLP26374 656 aa22.08■■□□□ 1.13
TMEM53-201ENST00000372235 ENAHQ8N8S7 591 aaPredicted RBP22.08■■□□□ 1.13
TMEM53-201ENST00000372235 VTI1AQ96AJ9 217 aa22.08■■□□□ 1.13
TMEM53-201ENST00000372235 LENG1Q96BZ8 264 aaPredicted RBP22.08■■□□□ 1.13
TMEM53-201ENST00000372235 PQBP1O60828 265 aaKnown RBP22.07■■□□□ 1.12
TMEM53-201ENST00000372235 ALDH5A1P51649 535 aaPredicted RBP22.07■■□□□ 1.12
TMEM53-201ENST00000372235 TRAF1Q13077 416 aa22.07■■□□□ 1.12
TMEM53-201ENST00000372235 SART3Q15020 963 aaKnown RBP22.07■■□□□ 1.12
TMEM53-201ENST00000372235 TLK2Q86UE8 772 aa22.07■■□□□ 1.12
TMEM53-201ENST00000372235 MCF2L2Q86YR7 1114 aa22.07■■□□□ 1.12
TMEM53-201ENST00000372235 GNEQ9Y223 722 aaKnown RBP22.07■■□□□ 1.12
TMEM53-201ENST00000372235 ABCB11O95342 1321 aa22.06■■□□□ 1.12
TMEM53-201ENST00000372235 NFIBO00712 420 aa22.06■■□□□ 1.12
TMEM53-201ENST00000372235 KIAA0355O15063 1070 aa22.06■■□□□ 1.12
TMEM53-201ENST00000372235 TLR3O15455 904 aaKnown RBP22.06■■□□□ 1.12
TMEM53-201ENST00000372235 RAG1P15918 1043 aa22.06■■□□□ 1.12
TMEM53-201ENST00000372235 IRX6P78412 446 aaPredicted RBP22.06■■□□□ 1.12
TMEM53-201ENST00000372235 RALYLQ86SE5 291 aaKnown RBP22.06■■□□□ 1.12
TMEM53-201ENST00000372235 TMEM39AQ9NV64 488 aa22.06■■□□□ 1.12
TMEM53-201ENST00000372235 NKRFO15226 690 aaKnown RBP eCLIP22.05■■□□□ 1.12
TMEM53-201ENST00000372235 CDC37Q16543 378 aaPredicted RBP22.05■■□□□ 1.12
TMEM53-201ENST00000372235 BRDTQ58F21 947 aaPredicted RBP22.05■■□□□ 1.12
TMEM53-201ENST00000372235 KIAA1211Q6ZU35 1233 aa22.05■■□□□ 1.12
TMEM53-201ENST00000372235 CLEC4DQ8WXI8 215 aa22.05■■□□□ 1.12
TMEM53-201ENST00000372235 TRIM43BA6NCK2 446 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 ARVCFO00192 962 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 SOX1O00570 391 aaPredicted RBP22.04■■□□□ 1.12
TMEM53-201ENST00000372235 SGSM2O43147 1006 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 DHX16O60231 1041 aaKnown RBP22.04■■□□□ 1.12
TMEM53-201ENST00000372235 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 CALML3P27482 149 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 RPS6P62753 249 aaKnown RBP22.04■■□□□ 1.12
TMEM53-201ENST00000372235 PDE4DQ08499 809 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 FSCN1Q16658 493 aaKnown RBP22.04■■□□□ 1.12
TMEM53-201ENST00000372235 DUSP28Q4G0W2 176 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 TAPT1Q6NXT6 567 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 ADGRF4Q8IZF3 695 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 NCOA7Q8NI08 942 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 BADQ92934 168 aa22.04■■□□□ 1.12
TMEM53-201ENST00000372235 TRIM43Q96BQ3 446 aaPredicted RBP22.04■■□□□ 1.12
TMEM53-201ENST00000372235 LRCH3Q96II8 777 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms