RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RBM43Q6ZSC3 357 aaKnown RBP29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 PRPF38AQ8NAV1 312 aaKnown RBP29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 TSPY26PQ9H489 355 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 C19orf81C9J6K1 198 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 LAD1O00515 517 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 ZNF202O95125 648 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 SYKP43405 635 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 MRE11P49959 708 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 MAP3K9P80192 1104 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 PRKG1Q13976 671 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 EMILIN3Q9NT22 766 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 MRVI1Q9Y6F6 885 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 SLF1Q9BQI6 1058 aa29.93■■■□□ 2.38
ATPAF1-202ENST00000371937 FBXO28Q9NVF7 368 aa29.93■■■□□ 2.38
ATPAF1-202ENST00000371937 VCAM1P19320 739 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 UBE2SQ16763 222 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 LETM2Q2VYF4 491 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 C4orf32Q8N8J7 132 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 TIGD1Q96MW7 591 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 CSRNP2Q9H175 543 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 IREB2P48200 963 aaKnown RBP29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 GRIN1Q05586 938 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 EAPPQ56P03 285 aaPredicted RBP29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 SDF4Q9BRK5 362 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 KCNH3Q9ULD8 1083 aa29.92■■■□□ 2.38
ATPAF1-202ENST00000371937 CCNT1O60563 726 aaKnown RBP29.91■■■□□ 2.38
ATPAF1-202ENST00000371937 AP3B2Q13367 1082 aa29.91■■■□□ 2.38
ATPAF1-202ENST00000371937 TANGO6Q9C0B7 1094 aa29.91■■■□□ 2.38
ATPAF1-202ENST00000371937 GRPEL1Q9HAV7 217 aa29.91■■■□□ 2.38
ATPAF1-202ENST00000371937 CSADQ9Y600 493 aa29.91■■■□□ 2.38
ATPAF1-202ENST00000371937 DLK2Q6UY11 383 aa29.9■■■□□ 2.38
ATPAF1-202ENST00000371937 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.9■■■□□ 2.38
ATPAF1-202ENST00000371937 CDCA5Q96FF9 252 aa29.9■■■□□ 2.38
ATPAF1-202ENST00000371937 C12orf42Q96LP6 360 aa29.9■■■□□ 2.38
ATPAF1-202ENST00000371937 CCDC192P0DO97 292 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 CCDC174Q6PII3 467 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 CKAP2LQ8IYA6 745 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 WDR90Q96KV7 1748 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 VWA3AA6NCI4 1184 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 POTECB2RU33 542 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L15C9J2P7 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L13C9JLJ4 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L11C9JVI0 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L18D6R9N7 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L22D6RA61 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L17D6RBQ6 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L19D6RCP7 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L20D6RJB6 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 MEIS2O14770 477 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 PRPHP41219 470 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L24Q0WX57 530 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 VGLL4Q14135 290 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 SPECC1Q5M775 1068 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 USP17L6PQ6QN14 398 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 SAMD1Q6SPF0 538 aaPredicted RBP29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 RPAP3Q9H6T3 665 aaPredicted RBP29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 AFG3L2Q9Y4W6 797 aa29.89■■■□□ 2.38
ATPAF1-202ENST00000371937 FOSP01100 380 aaPredicted RBP29.88■■■□□ 2.37
ATPAF1-202ENST00000371937 RBM46Q8TBY0 533 aaKnown RBP29.88■■■□□ 2.37
ATPAF1-202ENST00000371937 NAP1L4Q99733 375 aaKnown RBP29.88■■■□□ 2.37
ATPAF1-202ENST00000371937 MRPL11Q9Y3B7 192 aaKnown RBP29.88■■■□□ 2.37
ATPAF1-202ENST00000371937 NEMFO60524 1076 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 FLOT1O75955 427 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 FDX1P10109 184 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 FUCA2Q9BTY2 467 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 SNCAIPQ9Y6H5 919 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 ABCB11O95342 1321 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 LONP1P36776 959 aaKnown RBP29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 DGKZQ13574 1117 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 DTHD1Q6ZMT9 781 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 TMOD4Q9NZQ9 345 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 PPP1R9AQ9ULJ8 1098 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 PHIPQ8WWQ0 1821 aa29.87■■■□□ 2.37
ATPAF1-202ENST00000371937 PIK3CDO00329 1044 aa29.86■■■□□ 2.37
ATPAF1-202ENST00000371937 ICAM1P05362 532 aa29.86■■■□□ 2.37
ATPAF1-202ENST00000371937 HMGCS2P54868 508 aa29.86■■■□□ 2.37
ATPAF1-202ENST00000371937 PNMA2Q9UL42 364 aa29.86■■■□□ 2.37
ATPAF1-202ENST00000371937 PPP4R3AQ6IN85 833 aa29.85■■■□□ 2.37
ATPAF1-202ENST00000371937 SASS6Q6UVJ0 657 aa29.85■■■□□ 2.37
ATPAF1-202ENST00000371937 LDHDQ86WU2 507 aa29.85■■■□□ 2.37
ATPAF1-202ENST00000371937 GCFC2P16383 781 aaKnown RBP29.85■■■□□ 2.37
ATPAF1-202ENST00000371937 ANO3Q9BYT9 981 aa29.85■■■□□ 2.37
ATPAF1-202ENST00000371937 TMEM60Q9H2L4 133 aa29.85■■■□□ 2.37
ATPAF1-202ENST00000371937 SPDYE3A6NKU9 549 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 OPLAHO14841 1288 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 OR52Z1P0C646 297 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 USP11P51784 963 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 ANKRD13AQ8IZ07 590 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 RBSNQ9H1K0 784 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 SLC38A10Q9HBR0 1119 aa29.84■■■□□ 2.37
ATPAF1-202ENST00000371937 IL17AQ16552 155 aa29.83■■■□□ 2.37
ATPAF1-202ENST00000371937 SH3D19Q5HYK7 790 aa29.83■■■□□ 2.37
ATPAF1-202ENST00000371937 ELOA2Q8IYF1 753 aaPredicted RBP29.83■■■□□ 2.37
ATPAF1-202ENST00000371937 SYMPKQ92797 1274 aaKnown RBP29.83■■■□□ 2.37
ATPAF1-202ENST00000371937 CTDP1Q9Y5B0 961 aaPredicted RBP29.83■■■□□ 2.37
ATPAF1-202ENST00000371937 POLR2DO15514 142 aaKnown RBP29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 ZBED4O75132 1171 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 TTLL12Q14166 644 aaPredicted RBP29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 EPSTI1Q96J88 318 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 HOOK1Q9UJC3 728 aaKnown RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms