RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 UBA5Q9GZZ9 404 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 CNPY2Q9Y2B0 182 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 SLC12A7Q9Y666 1083 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 ABCB11O95342 1321 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 SMARCA1P28370 1054 aa21.53■■□□□ 1.04
CHTOP-202ENST00000368687 SNAP25P60880 206 aa21.53■■□□□ 1.04
CHTOP-202ENST00000368687 RASEFQ8IZ41 740 aa21.53■■□□□ 1.04
CHTOP-202ENST00000368687 RGS22Q8NE09 1264 aa21.53■■□□□ 1.04
CHTOP-202ENST00000368687 CYP39A1Q9NYL5 469 aa21.53■■□□□ 1.04
CHTOP-202ENST00000368687 SMCHD1A6NHR9 2005 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 ASB14A6NK59 587 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 SEPT4O43236 478 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 FAM133AQ8N9E0 248 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 NUP133Q8WUM0 1156 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 MPHOSPH6Q99547 160 aaKnown RBP21.52■■□□□ 1.04
CHTOP-202ENST00000368687 JMJD4Q9H9V9 463 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 ADD3Q9UEY8 706 aaKnown RBP21.52■■□□□ 1.04
CHTOP-202ENST00000368687 DDX20Q9UHI6 824 aaKnown RBP21.52■■□□□ 1.04
CHTOP-202ENST00000368687 FRMPD3Q5JV73 1810 aa21.52■■□□□ 1.04
CHTOP-202ENST00000368687 ZBTB5O15062 677 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 CNGA1P29973 690 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 CCND3P30281 292 aaPredicted RBP21.51■■□□□ 1.03
CHTOP-202ENST00000368687 RCAN1P53805 252 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 EXOSC10Q01780 885 aaKnown RBP21.51■■□□□ 1.03
CHTOP-202ENST00000368687 BLOC1S2Q6QNY1 142 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 NSMFQ6X4W1 530 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 FBXO11Q86XK2 927 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 MCF2L2Q86YR7 1114 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 STAG2Q8N3U4 1231 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 MTMR8Q96EF0 704 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 AMNQ9BXJ7 453 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 RIOX1Q9H6W3 641 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 SENP2Q9HC62 589 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 OGDHLQ9ULD0 1010 aa21.51■■□□□ 1.03
CHTOP-202ENST00000368687 MRPL11Q9Y3B7 192 aaKnown RBP21.51■■□□□ 1.03
CHTOP-202ENST00000368687 FARP2O94887 1054 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-202ENST00000368687 FGD1P98174 961 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 QRICH1Q2TAL8 776 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 ADCK5Q3MIX3 580 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 MUM1L1Q5H9M0 696 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 UBE2Q1Q7Z7E8 422 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 SAMD3Q8N6K7 520 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 JAKMIP1Q96N16 626 aaKnown RBP21.5■■□□□ 1.03
CHTOP-202ENST00000368687 SPZ1Q9BXG8 430 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 SNX14Q9Y5W7 946 aa21.5■■□□□ 1.03
CHTOP-202ENST00000368687 B4DLN1 442 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 MRPL12P52815 198 aaKnown RBP21.49■■□□□ 1.03
CHTOP-202ENST00000368687 PPP2R5BQ15173 497 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 USH1GQ495M9 461 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 RNF207Q6ZRF8 634 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 FBXL16Q8N461 479 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 USP26Q9BXU7 913 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 CPVLQ9H3G5 476 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 ABHD16BQ9H3Z7 469 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 VAT1LQ9HCJ6 419 aa21.49■■□□□ 1.03
CHTOP-202ENST00000368687 PTPDC1A2A3K4 754 aa21.48■■□□□ 1.03
CHTOP-202ENST00000368687 NFIBO00712 420 aa21.48■■□□□ 1.03
CHTOP-202ENST00000368687 AKR1A1P14550 325 aa21.48■■□□□ 1.03
CHTOP-202ENST00000368687 DNERQ8NFT8 737 aa21.48■■□□□ 1.03
CHTOP-202ENST00000368687 CLEC4DQ8WXI8 215 aa21.48■■□□□ 1.03
CHTOP-202ENST00000368687 RBM28Q9NW13 759 aaKnown RBP21.48■■□□□ 1.03
CHTOP-202ENST00000368687 MAP3K20Q9NYL2 800 aaKnown RBP21.48■■□□□ 1.03
CHTOP-202ENST00000368687 MCM3APO60318 1980 aa21.48■■□□□ 1.03
CHTOP-202ENST00000368687 BAZ2BQ9UIF8 2168 aaKnown RBP21.47■■□□□ 1.03
CHTOP-202ENST00000368687 PNMA6FA0A0J9YX94 578 aa21.47■■□□□ 1.03
CHTOP-202ENST00000368687 BAATQ14032 418 aaPredicted RBP21.47■■□□□ 1.03
CHTOP-202ENST00000368687 LHX8Q68G74 356 aa21.47■■□□□ 1.03
CHTOP-202ENST00000368687 APOA5Q6Q788 366 aa21.47■■□□□ 1.03
CHTOP-202ENST00000368687 ARMCX2Q7L311 632 aa21.47■■□□□ 1.03
CHTOP-202ENST00000368687 RRP36Q96EU6 259 aaKnown RBP21.47■■□□□ 1.03
CHTOP-202ENST00000368687 HTATIP2Q9BUP3 242 aa21.47■■□□□ 1.03
CHTOP-202ENST00000368687 LRRC2Q9BYS8 371 aa21.47■■□□□ 1.03
CHTOP-202ENST00000368687 GPHNQ9NQX3 736 aaPredicted RBP21.47■■□□□ 1.03
CHTOP-202ENST00000368687 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.47■■□□□ 1.03
CHTOP-202ENST00000368687 SEC63Q9UGP8 760 aaKnown RBP21.47■■□□□ 1.03
CHTOP-202ENST00000368687 RARBP10826 455 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 CNTN2Q02246 1040 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 NECAB2Q7Z6G3 386 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 FANCBQ8NB91 859 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 ARRDC4Q8NCT1 418 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 TRPV1Q8NER1 839 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 FGD4Q96M96 766 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 TM6SF1Q9BZW5 370 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 LCTP09848 1927 aa21.46■■□□□ 1.03
CHTOP-202ENST00000368687 CCDC196A0A1B0GTZ2 297 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 ZBTB43O43298 467 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 CASTP20810 708 aaKnown RBP21.45■■□□□ 1.02
CHTOP-202ENST00000368687 RPS6KB1P23443 525 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 ANAPC15P60006 121 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 RPS6P62753 249 aaKnown RBP21.45■■□□□ 1.02
CHTOP-202ENST00000368687 MICU3Q86XE3 530 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 HOMER1Q86YM7 354 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 CCDC144CPQ8IYA2 1237 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 MYL10Q9BUA6 226 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 FAM184BQ9ULE4 1060 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 PCDHA1Q9Y5I3 950 aa21.45■■□□□ 1.02
CHTOP-202ENST00000368687 CYTH3O43739 400 aa21.44■■□□□ 1.02
CHTOP-202ENST00000368687 SNAI1O95863 264 aaPredicted RBP21.44■■□□□ 1.02
CHTOP-202ENST00000368687 ZNF865P0CJ78 1059 aaPredicted RBP21.44■■□□□ 1.02
CHTOP-202ENST00000368687 CALML3P27482 149 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms