RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NYAP1Q6ZVC0 841 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 CCDC47Q96A33 483 aaKnown RBP15.82■□□□□ 0.12
USF1-202ENST00000368020 PPP1R2P41236 205 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 KCNB1Q14721 858 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 IL17AQ16552 155 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 ZNF658Q5TYW1 1059 aaPredicted RBP15.82■□□□□ 0.12
USF1-202ENST00000368020 RRAGBQ5VZM2 374 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 RWDD2AQ9UIY3 292 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 A0A1B0GTH6 734 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 ADCY7P51828 1080 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 STIM1Q13586 685 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 SYCP1Q15431 976 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 RASGRP4Q8TDF6 673 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
USF1-202ENST00000368020 RAB34Q9BZG1 259 aa15.81■□□□□ 0.12
USF1-202ENST00000368020 DDX4Q9NQI0 724 aaKnown RBP15.81■□□□□ 0.12
USF1-202ENST00000368020 COL2A1P02458 1487 aaPredicted RBP15.81■□□□□ 0.12
USF1-202ENST00000368020 PNMA6FA0A0J9YX94 578 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 GOLGA6L9A6NEM1 432 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 USP17L5A8MUK1 530 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 AKR1B1P15121 316 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
USF1-202ENST00000368020 ZNF543Q08ER8 600 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 CDKAL1Q5VV42 579 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 KIF18AQ8NI77 898 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 PIGSQ96S52 555 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 IDI2Q9BXS1 227 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 GJA3Q9Y6H8 435 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 ADAMTSL1Q8N6G6 1762 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 PPP1R3GB7ZBB8 358 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 ZSCAN12O43309 604 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 CCNT1O60563 726 aaKnown RBP15.8■□□□□ 0.12
USF1-202ENST00000368020 RPN1P04843 607 aaKnown RBP15.8■□□□□ 0.12
USF1-202ENST00000368020 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 SHMT1P34896 483 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 AMPD3Q01432 767 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 PAK1Q13153 545 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 TBX2Q13207 712 aaPredicted RBP15.8■□□□□ 0.12
USF1-202ENST00000368020 DPY19L2Q6NUT2 758 aa15.8■□□□□ 0.12
USF1-202ENST00000368020 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
USF1-202ENST00000368020 UTRNP46939 3433 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 RIOK3O14730 519 aaKnown RBP15.79■□□□□ 0.12
USF1-202ENST00000368020 STX10O60499 249 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 RBM5P52756 815 aaKnown RBP eCLIP15.79■□□□□ 0.12
USF1-202ENST00000368020 NR1I3Q14994 352 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 DLGAP5Q15398 846 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 TMEM266Q2M3C6 531 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 MCTP2Q6DN12 878 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 TRMT44Q8IYL2 757 aaKnown RBP15.79■□□□□ 0.12
USF1-202ENST00000368020 TRIM34Q9BYJ4 488 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
USF1-202ENST00000368020 CNOT7Q9UIV1 285 aaKnown RBP15.79■□□□□ 0.12
USF1-202ENST00000368020 CTIFO43310 598 aaKnown RBP15.78■□□□□ 0.12
USF1-202ENST00000368020 TPM1P09493 284 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 HSP90AA2PQ14568 343 aaPredicted RBP15.78■□□□□ 0.12
USF1-202ENST00000368020 LETM2Q2VYF4 491 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 KLHL10Q6JEL2 608 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
USF1-202ENST00000368020 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
USF1-202ENST00000368020 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 RIC8AQ9NPQ8 531 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 GPRC5DQ9NZD1 345 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 SIPA1L1O43166 1804 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 ITIH6Q6UXX5 1313 aa15.78■□□□□ 0.12
USF1-202ENST00000368020 H7C1D1 291 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 ADAMTS3O15072 1205 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 GCFC2P16383 781 aaKnown RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 MRPL12P52815 198 aaKnown RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 TRIM14Q14142 442 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 FKBP1CQ5VVH2 108 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 CABP7Q86V35 215 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 MICALL2Q8IY33 904 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 LRRC47Q8N1G4 583 aaKnown RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 TBCKQ8TEA7 893 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 NOC3LQ8WTT2 800 aaKnown RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 DCAF4Q8WV16 495 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 MKL1Q969V6 931 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 CALML4Q96GE6 196 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 L3MBTL3Q96JM7 780 aaPredicted RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 PDCL3Q9H2J4 239 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 SAMSN1Q9NSI8 373 aaKnown RBP15.77■□□□□ 0.12
USF1-202ENST00000368020 INTS13Q9NVM9 706 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 NYAP2Q9P242 653 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 SYNPO2Q9UMS6 1093 aa15.77■□□□□ 0.12
USF1-202ENST00000368020 MPHOSPH10O00566 681 aaKnown RBP15.77■□□□□ 0.11
USF1-202ENST00000368020 ZBTB5O15062 677 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms