RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 KRT32Q14532 448 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 ANO1Q5XXA6 986 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 DHX32Q7L7V1 743 aaKnown RBP23.17■■□□□ 1.3
H3F3A-204ENST00000366816 TMTC2Q8N394 836 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 FAM133AQ8N9E0 248 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 USP26Q9BXU7 913 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 DDX49Q9Y6V7 483 aaKnown RBP23.17■■□□□ 1.3
H3F3A-204ENST00000366816 WDR19Q8NEZ3 1342 aa23.16■■□□□ 1.3
H3F3A-204ENST00000366816 MKI67P46013 3256 aaKnown RBP23.16■■□□□ 1.3
H3F3A-204ENST00000366816 SOWAHBA6NEL2 793 aa23.16■■□□□ 1.3
H3F3A-204ENST00000366816 BAATQ14032 418 aaPredicted RBP23.16■■□□□ 1.3
H3F3A-204ENST00000366816 CCDC144CPQ8IYA2 1237 aa23.16■■□□□ 1.3
H3F3A-204ENST00000366816 JAKMIP1Q96N16 626 aaKnown RBP23.16■■□□□ 1.3
H3F3A-204ENST00000366816 PFASO15067 1338 aa23.15■■□□□ 1.3
H3F3A-204ENST00000366816 TNRC18O15417 2968 aaPredicted RBP23.15■■□□□ 1.3
H3F3A-204ENST00000366816 CYTH3O43739 400 aa23.15■■□□□ 1.3
H3F3A-204ENST00000366816 DDAH1O94760 285 aa23.15■■□□□ 1.3
H3F3A-204ENST00000366816 SNAI1O95863 264 aaPredicted RBP23.15■■□□□ 1.3
H3F3A-204ENST00000366816 HOMER1Q86YM7 354 aa23.15■■□□□ 1.3
H3F3A-204ENST00000366816 PIBF1Q8WXW3 757 aa23.15■■□□□ 1.3
H3F3A-204ENST00000366816 DDX20Q9UHI6 824 aaKnown RBP23.15■■□□□ 1.3
H3F3A-204ENST00000366816 OGDHLQ9ULD0 1010 aa23.15■■□□□ 1.3
H3F3A-204ENST00000366816 ASTN1O14525 1302 aa23.14■■□□□ 1.3
H3F3A-204ENST00000366816 PTPDC1A2A3K4 754 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 PPP1R11O60927 126 aaPredicted RBP23.14■■□□□ 1.29
H3F3A-204ENST00000366816 FARP2O94887 1054 aaPredicted RBP23.14■■□□□ 1.29
H3F3A-204ENST00000366816 MAMDC4Q6UXC1 1216 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 SLC30A10Q6XR72 485 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 ZNF467Q7Z7K2 595 aaPredicted RBP23.14■■□□□ 1.29
H3F3A-204ENST00000366816 FBXO11Q86XK2 927 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 CTCFLQ8NI51 663 aaPredicted RBP23.14■■□□□ 1.29
H3F3A-204ENST00000366816 DIS3LQ8TF46 1054 aaKnown RBP23.14■■□□□ 1.29
H3F3A-204ENST00000366816 TBC1D5Q92609 795 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 MTMR8Q96EF0 704 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 PIGSQ96S52 555 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 BRPF3Q9ULD4 1205 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 SLC12A7Q9Y666 1083 aa23.14■■□□□ 1.29
H3F3A-204ENST00000366816 CALML3P27482 149 aa23.13■■□□□ 1.29
H3F3A-204ENST00000366816 UBE2Q1Q7Z7E8 422 aa23.13■■□□□ 1.29
H3F3A-204ENST00000366816 CMTR1Q8N1G2 835 aaKnown RBP23.13■■□□□ 1.29
H3F3A-204ENST00000366816 RIOX1Q9H6W3 641 aa23.13■■□□□ 1.29
H3F3A-204ENST00000366816 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
H3F3A-204ENST00000366816 CNPY2Q9Y2B0 182 aa23.13■■□□□ 1.29
H3F3A-204ENST00000366816 ZBTB5O15062 677 aa23.12■■□□□ 1.29
H3F3A-204ENST00000366816 SEPT4O43236 478 aa23.12■■□□□ 1.29
H3F3A-204ENST00000366816 PLEKHA8P1O95397 391 aa23.12■■□□□ 1.29
H3F3A-204ENST00000366816 HMGB1P09429 215 aaKnown RBP23.12■■□□□ 1.29
H3F3A-204ENST00000366816 ZNF865P0CJ78 1059 aaPredicted RBP23.12■■□□□ 1.29
H3F3A-204ENST00000366816 MNX1P50219 401 aaPredicted RBP23.12■■□□□ 1.29
H3F3A-204ENST00000366816 RNF207Q6ZRF8 634 aa23.12■■□□□ 1.29
H3F3A-204ENST00000366816 ARMCX2Q7L311 632 aa23.12■■□□□ 1.29
H3F3A-204ENST00000366816 MSL3Q8N5Y2 521 aaKnown RBP23.12■■□□□ 1.29
H3F3A-204ENST00000366816 PAWRQ96IZ0 340 aaKnown RBP23.12■■□□□ 1.29
H3F3A-204ENST00000366816 MAP3K14Q99558 947 aa23.12■■□□□ 1.29
H3F3A-204ENST00000366816 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.12■■□□□ 1.29
H3F3A-204ENST00000366816 ABCB11O95342 1321 aa23.11■■□□□ 1.29
H3F3A-204ENST00000366816 SYNGAP1Q96PV0 1343 aa23.11■■□□□ 1.29
H3F3A-204ENST00000366816 KIF5BP33176 963 aa23.11■■□□□ 1.29
H3F3A-204ENST00000366816 RPS6P62753 249 aaKnown RBP23.11■■□□□ 1.29
H3F3A-204ENST00000366816 SGMS1Q86VZ5 419 aa23.11■■□□□ 1.29
H3F3A-204ENST00000366816 MICU3Q86XE3 530 aa23.11■■□□□ 1.29
H3F3A-204ENST00000366816 AMNQ9BXJ7 453 aa23.11■■□□□ 1.29
H3F3A-204ENST00000366816 EPB41L2O43491 1005 aaKnown RBP23.1■■□□□ 1.29
H3F3A-204ENST00000366816 CASTP20810 708 aaKnown RBP23.1■■□□□ 1.29
H3F3A-204ENST00000366816 FGD1P98174 961 aa23.1■■□□□ 1.29
H3F3A-204ENST00000366816 APOA5Q6Q788 366 aa23.1■■□□□ 1.29
H3F3A-204ENST00000366816 BLOC1S2Q6QNY1 142 aa23.1■■□□□ 1.29
H3F3A-204ENST00000366816 Q6ZUG5 572 aa23.1■■□□□ 1.29
H3F3A-204ENST00000366816 SRBD1Q8N5C6 995 aaKnown RBP23.1■■□□□ 1.29
H3F3A-204ENST00000366816 FANCBQ8NB91 859 aa23.1■■□□□ 1.29
H3F3A-204ENST00000366816 LENG1Q96BZ8 264 aaPredicted RBP23.1■■□□□ 1.29
H3F3A-204ENST00000366816 NRBP1Q9UHY1 535 aa23.1■■□□□ 1.29
H3F3A-204ENST00000366816 ZHX1Q9UKY1 873 aaPredicted RBP23.1■■□□□ 1.29
H3F3A-204ENST00000366816 BAZ2BQ9UIF8 2168 aaKnown RBP23.1■■□□□ 1.29
H3F3A-204ENST00000366816 MSCO60682 206 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 MYCNP04198 464 aaPredicted RBP23.09■■□□□ 1.29
H3F3A-204ENST00000366816 CALM1P0DP23 149 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 CALM2P0DP24 149 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 CALM3P0DP25 149 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 RPS6KB1P23443 525 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 ACVR2BQ13705 512 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 SYNE3Q6ZMZ3 975 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 CCDC82Q8N4S0 544 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
H3F3A-204ENST00000366816 PCDHA1Q9Y5I3 950 aa23.09■■□□□ 1.29
H3F3A-204ENST00000366816 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.29
H3F3A-204ENST00000366816 KLF18A0A0U1RQI7 1052 aa23.08■■□□□ 1.29
H3F3A-204ENST00000366816 ASB14A6NK59 587 aa23.08■■□□□ 1.29
H3F3A-204ENST00000366816 EEPD1Q7L9B9 569 aa23.08■■□□□ 1.29
H3F3A-204ENST00000366816 ANKLE1Q8NAG6 615 aa23.08■■□□□ 1.29
H3F3A-204ENST00000366816 NAP1L2Q9ULW6 460 aaPredicted RBP23.08■■□□□ 1.29
H3F3A-204ENST00000366816 hCG_1642624A0A1W2PR95 340 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 OPLAHO14841 1288 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 SEC24BO95487 1268 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 CAPN2P17655 700 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 PSMA5P28066 241 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 APOBRQ0VD83 1088 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 GJC2Q5T442 439 aaPredicted RBP23.07■■□□□ 1.28
H3F3A-204ENST00000366816 NECAB2Q7Z6G3 386 aa23.07■■□□□ 1.28
H3F3A-204ENST00000366816 RGS22Q8NE09 1264 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms